RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 U3KQK5 164 aa11.15□□□□□ -0.62
SCLT1-209ENST00000511426 S100A2P29034 98 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 BAGE3Q86Y29 109 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 C18orf32Q8TCD1 76 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 PTH2Q96A98 100 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-209ENST00000511426 NDUFAF3Q9BU61 184 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 CBY3A6NI87 242 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
SCLT1-209ENST00000511426 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
SCLT1-209ENST00000511426 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
SCLT1-209ENST00000511426 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
SCLT1-209ENST00000511426 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
SCLT1-209ENST00000511426 DPH3P1Q9H4G8 78 aa11.13□□□□□ -0.63
SCLT1-209ENST00000511426 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-209ENST00000511426 M0R381 172 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 RAB4AP20338 218 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 FXYD7P58549 80 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 TMEM18Q96B42 140 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 SPXQ9BT56 116 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
SCLT1-209ENST00000511426 MUC21A0A0G2JKD1 596 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 MUC21A0A140T8X8 626 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 MRPL51Q4U2R6 128 aaKnown RBP11.11□□□□□ -0.63
SCLT1-209ENST00000511426 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 LINC01587Q99440 93 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 WNK1Q9H4A3 2382 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 EVI2AP22794 236 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 CKS2P33552 79 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 PRR31Q5SQ13 230 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 CHCHD1Q96BP2 118 aaKnown RBP11.11□□□□□ -0.63
SCLT1-209ENST00000511426 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 XCL2Q9UBD3 114 aa11.11□□□□□ -0.63
SCLT1-209ENST00000511426 SERF1AO75920 110 aa11.1□□□□□ -0.63
SCLT1-209ENST00000511426 PPP1R17O96001 155 aa11.1□□□□□ -0.63
SCLT1-209ENST00000511426 POM121L12Q8N7R1 296 aa11.1□□□□□ -0.63
SCLT1-209ENST00000511426 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
SCLT1-209ENST00000511426 MDFICQ9P1T7 246 aa11.1□□□□□ -0.63
SCLT1-209ENST00000511426 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
SCLT1-209ENST00000511426 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 D6R8Y8 96 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 SMIM17P0DL12 118 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 IGLL1P15814 213 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 SSTP61278 116 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 C1orf158Q8N1D5 194 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 KIR2DL5BQ8NHK3 375 aa11.09□□□□□ -0.63
SCLT1-209ENST00000511426 M0R2P5 195 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 AGRNO00468 2067 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 PMCHP20382 165 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 TMEM263Q8WUH6 116 aaKnown RBP11.08□□□□□ -0.64
SCLT1-209ENST00000511426 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
SCLT1-209ENST00000511426 JMJD1CQ15652 2540 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 IFITM10A6NMD0 228 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 PRSS47A8MTI9 375 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 GIG44P09565 113 aaPredicted RBP11.07□□□□□ -0.64
SCLT1-209ENST00000511426 AKR1D1P51857 326 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 LINC00310P59036 64 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
SCLT1-209ENST00000511426 A8MWV9 139 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 HSBP1O75506 76 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 LINC00614P0C842 121 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 APOC4P55056 127 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 ZNF876PQ49A33 203 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 ZNF705AQ6ZN79 300 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-209ENST00000511426 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 SORL1Q92673 2214 aa11.06□□□□□ -0.64
SCLT1-209ENST00000511426 FABP4P15090 132 aa11.05□□□□□ -0.64
SCLT1-209ENST00000511426 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
SCLT1-209ENST00000511426 EGFEM1PQ0D2K5 195 aa11.05□□□□□ -0.64
SCLT1-209ENST00000511426 PDZD11Q5EBL8 140 aa11.05□□□□□ -0.64
SCLT1-209ENST00000511426 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
SCLT1-209ENST00000511426 IL17DQ8TAD2 202 aa11.05□□□□□ -0.64
SCLT1-209ENST00000511426 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
SCLT1-209ENST00000511426 C16orf74Q96GX8 76 aa11.05□□□□□ -0.64
SCLT1-209ENST00000511426 SAMD10Q9BYL1 202 aa11.05□□□□□ -0.64
SCLT1-209ENST00000511426 TEP1Q99973 2627 aaKnown RBP11.05□□□□□ -0.64
SCLT1-209ENST00000511426 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 NIT1Q86X76 327 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
SCLT1-209ENST00000511426 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
SCLT1-209ENST00000511426 TNFRSF6BO95407 300 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 HTN1P15515 57 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 C20orf78Q9BR46 151 aa11.04□□□□□ -0.64
SCLT1-209ENST00000511426 EDA2RQ9HAV5 297 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms