RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 Q8N976 141 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 ZNRF2Q8NHG8 242 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 RNF222A6NCQ9 220 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 C7orf33Q8WU49 177 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 C11orf52Q96A22 123 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 TMEM141Q96I45 108 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 SCGB3A1Q96QR1 104 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 EDA2RQ9HAV5 297 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 LINC00474Q9P2X8 69 aa7.21□□□□□ -1.25
POLR2J3-215ENST00000511313 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 ZNF324O75467 553 aaPredicted RBP7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 VAMP3Q15836 100 aa7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 A0A0J9YWU9 116 aa7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 IGLV2-14P01704 120 aa7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 SNRPCP09234 159 aaKnown RBP7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 GFI1BQ5VTD9 330 aa7.21□□□□□ -1.26
POLR2J3-215ENST00000511313 PROP1O75360 226 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 IFITM10A6NMD0 228 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 F8WDY8 70 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 ANGP03950 147 aaKnown RBP7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 GTSF1LQ9H1H1 148 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 MRPL16Q9NX20 251 aaKnown RBP7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 ANKRD17O75179 2603 aaKnown RBP7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 TRAV12-2A0A075B6T6 113 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 CXCL5P42830 114 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 PTH2Q96A98 100 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 C5orf30Q96GV9 206 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 SPANXA1Q9NS26 97 aa7.2□□□□□ -1.26
POLR2J3-215ENST00000511313 TRAV26-1A0A087WT03 109 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 IGLC2P0DOY2 106 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 NTF3P20783 257 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 Q8TAT8 98 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 H0YIZ8 118 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 SLC17A3O00476 420 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 ZNF705BP0CI00 300 aaPredicted RBP7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 ERASQ7Z444 233 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 DERL1Q9BUN8 251 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 A0A0J9YY99 117 aa7.19□□□□□ -1.26
POLR2J3-215ENST00000511313 RBMY1BA6NDE4 496 aaKnown RBP7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 RBMY1EA6NEQ0 496 aaKnown RBP7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 RBMY1DP0C7P1 496 aaKnown RBP7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 RBMY1A1P0DJD3 496 aaKnown RBP7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 RBMY1CP0DJD4 496 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 POM121L12Q8N7R1 296 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 DMDP11532 3685 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 LELP1Q5T871 98 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 SCO1O75880 301 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 ZC2HC1AQ96GY0 325 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 DMRT1Q9Y5R6 373 aa7.18□□□□□ -1.26
POLR2J3-215ENST00000511313 HIGD1CA8MV81 97 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 WIPF1O43516 503 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 HOXA5P20719 270 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 UBE2WQ96B02 151 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 CRYGDP07320 174 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 ODF3L2Q3SX64 289 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 Q5BKY6 102 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 KPRPQ5T749 579 aaPredicted RBP7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 VCANP13611 3396 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 IGKV1OR2-108A0A075B7D4 117 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 MIAQ16674 131 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 MORN5Q5VZ52 161 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 C10orf99Q6UWK7 81 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 HELZ2Q9BYK8 2649 aaKnown RBP7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 MYO15AQ9UKN7 3530 aa7.17□□□□□ -1.26
POLR2J3-215ENST00000511313 A6NJY4 79 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 RPL24P83731 157 aaKnown RBP7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 LAGE3Q14657 143 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 C6orf226Q5I0X4 101 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 SRP19P09132 144 aaKnown RBP7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 LYZL1Q6UWQ5 148 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 Q6ZS46 218 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 MDFIQ99750 246 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 OVOL2Q9BRP0 275 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 SLC25A20O43772 301 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 KLF12Q9Y4X4 402 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 LTAP01374 205 aa7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 C14orf178Q8N769 122 aaPredicted RBP7.16□□□□□ -1.26
POLR2J3-215ENST00000511313 CHD7Q9P2D1 2997 aa7.15□□□□□ -1.26
POLR2J3-215ENST00000511313 IL15RAQ13261 267 aa7.15□□□□□ -1.26
POLR2J3-215ENST00000511313 MRPL36Q9P0J6 103 aaKnown RBP7.15□□□□□ -1.26
POLR2J3-215ENST00000511313 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.26
POLR2J3-215ENST00000511313 HERVK_113P63121 156 aa7.15□□□□□ -1.26
POLR2J3-215ENST00000511313 PCP4P48539 62 aa7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 TIRAPP58753 221 aa7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 GCSAMLQ5JQS6 135 aa7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 SCGB1D4Q6XE38 83 aa7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 DCANP1Q8TF63 244 aa7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 LBHQ53QV2 105 aaPredicted RBP7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.27
POLR2J3-215ENST00000511313 RS1O15537 224 aa7.14□□□□□ -1.27
POLR2J3-215ENST00000511313 WFDC1Q9HC57 220 aa7.14□□□□□ -1.27
POLR2J3-215ENST00000511313 MYO9AB2RTY4 2548 aa7.14□□□□□ -1.27
POLR2J3-215ENST00000511313 NKAPP1Q8N9T2 125 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms