RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 UBE2E1P51965 193 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 C3orf22Q8N5N4 141 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 IGHV3-11P01762 117 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 LINC00479Q96M42 142 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 IGKV1-16P04430 117 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 LRRK2Q5S007 2527 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
HTT-208ENST00000510626 K7EN84 100 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 PATE3B3GLJ2 98 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 NCOR2Q9Y618 2525 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 NDUFA7O95182 113 aa6.65□□□□□ -1.34
HTT-208ENST00000510626 C5orf63A6NC05 138 aa6.65□□□□□ -1.34
HTT-208ENST00000510626 GTSF1Q8WW33 167 aa6.65□□□□□ -1.34
HTT-208ENST00000510626 CENPVL3A0A0U1RRI6 287 aa6.65□□□□□ -1.34
HTT-208ENST00000510626 RNF114Q9Y508 228 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.65□□□□□ -1.35
HTT-208ENST00000510626 ZNF524Q96C55 264 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 A0A1B0GX51 115 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 NBL1P41271 181 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 ZNF672Q499Z4 452 aaPredicted RBP6.65□□□□□ -1.35
HTT-208ENST00000510626 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 POLQO75417 2590 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 RNF183Q96D59 192 aa6.65□□□□□ -1.35
HTT-208ENST00000510626 MTORP42345 2549 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 ZFHX2Q9C0A1 2572 aaPredicted RBP6.64□□□□□ -1.35
HTT-208ENST00000510626 NTN5Q8WTR8 489 aaPredicted RBP6.64□□□□□ -1.35
HTT-208ENST00000510626 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 E9PLD3 99 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 RNASE8Q8TDE3 154 aaKnown RBP6.64□□□□□ -1.35
HTT-208ENST00000510626 TFF2Q03403 129 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 J3QLI3 93 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 TIMM17BO60830 172 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 KRTAP27-1Q3LI81 207 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 PCP2Q8IVA1 136 aa6.64□□□□□ -1.35
HTT-208ENST00000510626 COLQQ9Y215 455 aaPredicted RBP6.64□□□□□ -1.35
HTT-208ENST00000510626 ZNF625Q96I27 306 aaPredicted RBP6.63□□□□□ -1.35
HTT-208ENST00000510626 H7C423 109 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 PTPRBP23467 1997 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 IGKV1-39P01597 117 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 IGKV1D-39P04432 117 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 IGHV3-73A0A0B4J1V6 119 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 PIEZO2Q9H5I5 2752 aa6.63□□□□□ -1.35
HTT-208ENST00000510626 FXYD7P58549 80 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 DKK2Q9UBU2 259 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 NDUFA11Q86Y39 141 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 NPBQ8NG41 125 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 LINC00527Q9UJ94 153 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 IGHV3OR16-8A0A075B7F1 116 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 METRNQ9UJH8 293 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 ODF3Q96PU9 254 aa6.62□□□□□ -1.35
HTT-208ENST00000510626 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 MCRIP2Q9BUT9 160 aaKnown RBP6.61□□□□□ -1.35
HTT-208ENST00000510626 IGLV1-44P01699 117 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 LGALS9O00182 355 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 ELANEP08246 267 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 ADAMTS20P59510 1910 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 Q9H8V8 135 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 GP9P14770 177 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 RSPO4Q2I0M5 234 aaPredicted RBP6.61□□□□□ -1.35
HTT-208ENST00000510626 PSMB8P28062 276 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 DUX4L9Q6RFH8 374 aaPredicted RBP6.61□□□□□ -1.35
HTT-208ENST00000510626 WT1-ASQ06250 92 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 C17orf58Q2M2W7 97 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 C16orf54Q6UWD8 224 aa6.61□□□□□ -1.35
HTT-208ENST00000510626 Q8N1Y9 231 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 DAND5Q8N907 189 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 FAM120AOSQ5T036 256 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 MDFICQ9P1T7 246 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 DKK1O94907 266 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 FSTL3O95633 263 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 HTN3P15516 51 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 APOC4P55056 127 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 VWCEQ96DN2 955 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 IGHV7-4-1A0A0J9YVY3 117 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 ZFP2Q6ZN57 461 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 WFDC2Q14508 124 aa6.6□□□□□ -1.35
HTT-208ENST00000510626 RAI1Q7Z5J4 1906 aaPredicted RBP6.59□□□□□ -1.35
HTT-208ENST00000510626 FXYD2P54710 66 aa6.59□□□□□ -1.35
HTT-208ENST00000510626 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.35
HTT-208ENST00000510626 C9orf47Q6ZRZ4 202 aa6.59□□□□□ -1.35
HTT-208ENST00000510626 DYNAPQ8N1N2 210 aa6.59□□□□□ -1.35
HTT-208ENST00000510626 TET2Q6N021 2002 aaPredicted RBP6.59□□□□□ -1.35
HTT-208ENST00000510626 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
HTT-208ENST00000510626 MUSTN1Q8IVN3 82 aa6.59□□□□□ -1.35
HTT-208ENST00000510626 SERP2Q8N6R1 65 aa6.59□□□□□ -1.36
HTT-208ENST00000510626 IGLV3-9A0A075B6K5 115 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 ODF1Q14990 250 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 IGFL3Q6UXB1 125 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 A0A0J9YX75 114 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 YPEL4Q96NS1 127 aa6.58□□□□□ -1.36
HTT-208ENST00000510626 MRPL36Q9P0J6 103 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms