RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 MAP1LC3B2A6NCE7 125 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 FHITP49789 147 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 MAP1LC3BQ9GZQ8 125 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 FAT1Q14517 4588 aa12.14□□□□□ -0.47
TPM3-220ENST00000509601 TRBV6-4A0A1B0GX49 114 aa12.13□□□□□ -0.47
TPM3-220ENST00000509601 PPT1P50897 306 aa12.13□□□□□ -0.47
TPM3-220ENST00000509601 Q6ZSN1 163 aa12.13□□□□□ -0.47
TPM3-220ENST00000509601 Q86TA4 180 aa12.13□□□□□ -0.47
TPM3-220ENST00000509601 K7EP13 123 aa12.12□□□□□ -0.47
TPM3-220ENST00000509601 EVI2AP22794 236 aa12.12□□□□□ -0.47
TPM3-220ENST00000509601 NHLRC2Q8NBF2 726 aa12.12□□□□□ -0.47
TPM3-220ENST00000509601 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
TPM3-220ENST00000509601 HMSDA8MTL9 139 aa12.11□□□□□ -0.47
TPM3-220ENST00000509601 ZNF345Q14585 488 aa12.11□□□□□ -0.47
TPM3-220ENST00000509601 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
TPM3-220ENST00000509601 PRADC1Q9BSG0 188 aa12.11□□□□□ -0.47
TPM3-220ENST00000509601 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
TPM3-220ENST00000509601 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
TPM3-220ENST00000509601 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
TPM3-220ENST00000509601 RHOHQ15669 191 aa12.1□□□□□ -0.47
TPM3-220ENST00000509601 PIK3CD-AS1Q5SR53 167 aa12.1□□□□□ -0.47
TPM3-220ENST00000509601 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
TPM3-220ENST00000509601 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
TPM3-220ENST00000509601 JPT2Q9H910 190 aa12.1□□□□□ -0.47
TPM3-220ENST00000509601 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 CRYGDP07320 174 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 SEC11BP0C7V7 166 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 S100A4P26447 101 aaKnown RBP12.09□□□□□ -0.47
TPM3-220ENST00000509601 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
TPM3-220ENST00000509601 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 ZFP2Q6ZN57 461 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 PARLQ9H300 379 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 IL36BQ9NZH7 164 aa12.09□□□□□ -0.47
TPM3-220ENST00000509601 A0A087WTM6 91 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 B4DEV8 164 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 SH2D1AO60880 128 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 MGST1P10620 155 aaKnown RBP12.08□□□□□ -0.48
TPM3-220ENST00000509601 ASIPP42127 132 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
TPM3-220ENST00000509601 CST9LP1Q5W188 147 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 FMC1Q96HJ9 113 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 SAMD10Q9BYL1 202 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 Q9UF83 564 aa12.08□□□□□ -0.48
TPM3-220ENST00000509601 A0A0D9SG52 128 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 A8MWV9 139 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 PAGE4O60829 102 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 LTAP01374 205 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 TCEAL7Q9BRU2 100 aa12.07□□□□□ -0.48
TPM3-220ENST00000509601 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 H3BVH4 76 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 M0R036 132 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 UBE2G1P62253 170 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 FAM162BQ5T6X4 162 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 C10orf126Q8N4M7 172 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 ATP6V0E2Q8NHE4 81 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 SCRT2Q9NQ03 307 aa12.06□□□□□ -0.48
TPM3-220ENST00000509601 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 BCL2L11O43521 198 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 LELP1Q5T871 98 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 FAM213BQ8TBF2 198 aa12.05□□□□□ -0.48
TPM3-220ENST00000509601 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
TPM3-220ENST00000509601 EREGO14944 169 aa12.04□□□□□ -0.48
TPM3-220ENST00000509601 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
TPM3-220ENST00000509601 C14orf178Q8N769 122 aaPredicted RBP12.04□□□□□ -0.48
TPM3-220ENST00000509601 A0A1B0GV50 99 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 AKR1C3P42330 323 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 GAGE1Q13065 139 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 GAGE4Q13068 117 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 GAGE5Q13069 117 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 TMUB2Q71RG4 321 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 Q8N1X5 172 aa12.03□□□□□ -0.48
TPM3-220ENST00000509601 TMSB15BA0A087X1C1 80 aa12.02□□□□□ -0.49
TPM3-220ENST00000509601 SFRP2Q96HF1 295 aa12.02□□□□□ -0.49
TPM3-220ENST00000509601 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
TPM3-220ENST00000509601 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
TPM3-220ENST00000509601 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
TPM3-220ENST00000509601 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
TPM3-220ENST00000509601 IGHV3-33P01772 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms