RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 Q6ZSN1 163 aa8.4□□□□□ -1.06
PDPN-208ENST00000509009 BORCS7-ASMTA0A0B4J1R7 106 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 FABP5P3A8MUU1 101 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 RHOHQ15669 191 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 ZFP69Q49AA0 526 aa8.39□□□□□ -1.07
PDPN-208ENST00000509009 FXYD6-FXYD2A0A087WZ82 144 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 CTXND1A0A1B0GTU2 59 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 LRCOL1A6NCL2 159 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 EPM2AB3EWF7 344 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 LELP1Q5T871 98 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 BOLA1Q9Y3E2 137 aa8.38□□□□□ -1.07
PDPN-208ENST00000509009 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
PDPN-208ENST00000509009 IFNA7P01567 189 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 MGST1P10620 155 aaKnown RBP8.37□□□□□ -1.07
PDPN-208ENST00000509009 GCSHP23434 173 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 UBE2G2P60604 165 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 OR2T35Q8NGX2 323 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
PDPN-208ENST00000509009 FAM74A7A6NL05 159 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 A8MWV9 139 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 PSCAO43653 123 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 S100A4P26447 101 aaKnown RBP8.36□□□□□ -1.07
PDPN-208ENST00000509009 CRIP1P50238 77 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 FGF8P55075 233 aaPredicted RBP8.36□□□□□ -1.07
PDPN-208ENST00000509009 LGALSLQ3ZCW2 172 aaPredicted RBP8.36□□□□□ -1.07
PDPN-208ENST00000509009 NKX6-2Q9C056 277 aaPredicted RBP8.36□□□□□ -1.07
PDPN-208ENST00000509009 PARLQ9H300 379 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 JPT2Q9H910 190 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 Q9UF83 564 aa8.36□□□□□ -1.07
PDPN-208ENST00000509009 G3V3Q6 166 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 PEX7O00628 323 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 ASIPP42127 132 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 DNLZQ5SXM8 178 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 AKR1C8PQ5T2L2 129 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 UFSP1Q6NVU6 142 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 SAMD10Q9BYL1 202 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 Q9HAA7 133 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 CYTL1Q9NRR1 136 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 IL36BQ9NZH7 164 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 FAT1Q14517 4588 aa8.35□□□□□ -1.07
PDPN-208ENST00000509009 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 GAGE1Q13065 139 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 GAGE4Q13068 117 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 GAGE5Q13069 117 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 Q86TA4 180 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 ZC2HC1AQ96GY0 325 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 ZFP30Q9Y2G7 519 aa8.34□□□□□ -1.07
PDPN-208ENST00000509009 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
PDPN-208ENST00000509009 B4DEV8 164 aa8.33□□□□□ -1.08
PDPN-208ENST00000509009 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
PDPN-208ENST00000509009 INAFM2P0DMQ5 153 aa8.33□□□□□ -1.08
PDPN-208ENST00000509009 LINC00694P0DN24 101 aa8.33□□□□□ -1.08
PDPN-208ENST00000509009 Q8N3U1 123 aa8.33□□□□□ -1.08
PDPN-208ENST00000509009 C14orf178Q8N769 122 aaPredicted RBP8.33□□□□□ -1.08
PDPN-208ENST00000509009 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
PDPN-208ENST00000509009 GRIFINA4D1Z8 144 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 MAP1LC3B2A6NCE7 125 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 H3BVH4 76 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 M0R036 132 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 SH2D1AO60880 128 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
PDPN-208ENST00000509009 FHITP49789 147 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 RGS21Q2M5E4 152 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 Q6ZNX1 250 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 Q8N814 137 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 MAP1LC3BQ9GZQ8 125 aa8.32□□□□□ -1.08
PDPN-208ENST00000509009 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
PDPN-208ENST00000509009 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 ARPC5O15511 151 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 LAGE3Q14657 143 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 ZNF674Q2M3X9 581 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 Q5VSD8 79 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 FRZBQ92765 325 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 FMC1Q96HJ9 113 aa8.31□□□□□ -1.08
PDPN-208ENST00000509009 A0A087WWC5 75 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 UBE2G1P62253 170 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 CST9LP1Q5W188 147 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
PDPN-208ENST00000509009 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms