RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 FXYD7P58549 80 aa8.72□□□□□ -1.01
PRPF40B-203ENST00000508736 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
PRPF40B-203ENST00000508736 PRR9Q5T870 116 aa8.72□□□□□ -1.01
PRPF40B-203ENST00000508736 MXRA5Q9NR99 2828 aa8.72□□□□□ -1.01
PRPF40B-203ENST00000508736 TP73-AS1Q9UF72 201 aa8.72□□□□□ -1.01
PRPF40B-203ENST00000508736 SONP18583 2426 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-203ENST00000508736 LGALS9O00182 355 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 ATP5LO75964 103 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 TM4SF20Q53R12 229 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 C10orf99Q6UWK7 81 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 APRG1Q8IVJ8 170 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 OR9G4Q8NGQ1 327 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.01
PRPF40B-203ENST00000508736 F8P00451 2351 aa8.71□□□□□ -1.02
PRPF40B-203ENST00000508736 J3KRW8 73 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 GAS8-AS1O95177 125 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 GATA1P15976 413 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 LAGE3Q14657 143 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 ANKRD39Q53RE8 183 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 NRACQ8N912 160 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 TMEM158Q8WZ71 300 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 PHLDA3Q9Y5J5 127 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 IGLV2-18A0A075B6J9 118 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 RNASE4P34096 147 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 DPH3P1Q9H4G8 78 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 HIVEP2P31629 2446 aa8.7□□□□□ -1.02
PRPF40B-203ENST00000508736 SIVA1O15304 175 aa8.69□□□□□ -1.02
PRPF40B-203ENST00000508736 PRSS1P07477 247 aa8.69□□□□□ -1.02
PRPF40B-203ENST00000508736 FGF6P10767 208 aa8.69□□□□□ -1.02
PRPF40B-203ENST00000508736 SEC11AP67812 179 aa8.69□□□□□ -1.02
PRPF40B-203ENST00000508736 C2orf91Q6ZV80 131 aa8.69□□□□□ -1.02
PRPF40B-203ENST00000508736 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
PRPF40B-203ENST00000508736 IGKV3-7A0A075B6H7 116 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 K7EMI3 77 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 M0R381 172 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 PPP1R17O96001 155 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 SMIM17P0DL12 118 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 ODF1Q14990 250 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 Q6ZQT7 251 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 WFDC3Q8IUB2 231 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 AP1S3Q96PC3 154 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 INAFM1C9JVW0 142 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 DKK2Q9UBU2 259 aa8.68□□□□□ -1.02
PRPF40B-203ENST00000508736 DPM2O94777 84 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 IGKCP01834 107 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 NMUP48645 174 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 HSD52Q0P140 79 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 SCGB2A2Q13296 93 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 WFDC12Q8WWY7 111 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
PRPF40B-203ENST00000508736 IGHV4OR15-8A0A075B7B6 117 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 A0A087WW49 117 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 A6NDN8 102 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 F6UB75 175 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 TAX1BP3O14907 124 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 VAMP3Q15836 100 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 DNAJC9-AS1A6NH13 148 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 KLLNB2CW77 178 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 SRD5A1P18405 259 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 DEFB1P60022 68 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 FAM159AQ6UWV7 190 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
PRPF40B-203ENST00000508736 MTORP42345 2549 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 NXPH4O95158 308 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 MGPP08493 103 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 HOXD3P31249 432 aaPredicted RBP8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 Q6ZSV7 163 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 Q6ZVH6 145 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 C4orf3Q8WVX3 66 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 DUX5Q96PT3 197 aa8.65□□□□□ -1.02
PRPF40B-203ENST00000508736 CCL25O15444 150 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 PLNP26678 52 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 ANK3Q12955 4377 aaKnown RBP8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 C7orf71A4D174 169 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 RNASE3P12724 160 aaKnown RBP8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 EDN2P20800 178 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 SYNJ2BPP57105 145 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 OR4C5Q8NGB2 326 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 RASL10AQ92737 203 aa8.64□□□□□ -1.03
PRPF40B-203ENST00000508736 NSD1Q96L73 2696 aaPredicted RBP8.63□□□□□ -1.03
PRPF40B-203ENST00000508736 A0A087WX48 190 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms