RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 RHOHQ15669 191 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 ZFP69Q49AA0 526 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 SMUG1Q53HV7 270 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 LINC01556Q5JQF7 62 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 ZNF506Q5JVG8 444 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 PRNTQ86SH4 94 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 ACTR3CQ9C0K3 210 aaPredicted RBP8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 TNFSF18Q9UNG2 199 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
HMGCS1-205ENST00000508319 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
HMGCS1-205ENST00000508319 GIPP09681 153 aaPredicted RBP8.74□□□□□ -1.01
HMGCS1-205ENST00000508319 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
HMGCS1-205ENST00000508319 RPL7L1Q6DKI1 246 aaKnown RBP8.74□□□□□ -1.01
HMGCS1-205ENST00000508319 BATF3Q9NR55 127 aa8.74□□□□□ -1.01
HMGCS1-205ENST00000508319 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
HMGCS1-205ENST00000508319 A0A1W2PRE2 83 aa8.73□□□□□ -1.01
HMGCS1-205ENST00000508319 CIDEAO60543 219 aa8.73□□□□□ -1.01
HMGCS1-205ENST00000508319 PTH2Q96A98 100 aa8.73□□□□□ -1.01
HMGCS1-205ENST00000508319 LINC00479Q96M42 142 aa8.73□□□□□ -1.01
HMGCS1-205ENST00000508319 PRADC1Q9BSG0 188 aa8.73□□□□□ -1.01
HMGCS1-205ENST00000508319 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 FXYD6-FXYD2A0A087WZ82 144 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 IGKV3D-20A0A0C4DH25 116 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 LRCOL1A6NCL2 159 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 MGST1P10620 155 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 SAPCD1Q5SSQ6 148 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 INO80EQ8NBZ0 244 aaPredicted RBP8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 ARL2-SNX15V9GYD0 113 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 HERC1Q15751 4861 aa8.72□□□□□ -1.01
HMGCS1-205ENST00000508319 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 CTXND1A0A1B0GTU2 59 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 LINC00694P0DN24 101 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 LELP1Q5T871 98 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 Q86TA4 180 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 PARLQ9H300 379 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 MYCBP2O75592 4640 aa8.71□□□□□ -1.02
HMGCS1-205ENST00000508319 SRRM2Q9UQ35 2752 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 BORCS7-ASMTA0A0B4J1R7 106 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 FAM74A7A6NL05 159 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 G3V3Q6 166 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 PEX7O00628 323 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 IFNA7P01567 189 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 UBE2G2P60604 165 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 Q6ZSN1 163 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 Q9HAA7 133 aa8.7□□□□□ -1.02
HMGCS1-205ENST00000508319 PSCAO43653 123 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 GCSHP23434 173 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 FGF8P55075 233 aaPredicted RBP8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 LAGE3Q14657 143 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 Q5VSD8 79 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 ZFP2Q6ZN57 461 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 Q8N3U1 123 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 OR2T35Q8NGX2 323 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
HMGCS1-205ENST00000508319 A8MWV9 139 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 H3BVH4 76 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 ASIPP42127 132 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 NTN5Q8WTR8 489 aaPredicted RBP8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 IL36BQ9NZH7 164 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 Q9UF83 564 aa8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 FLG2Q5D862 2391 aaPredicted RBP8.68□□□□□ -1.02
HMGCS1-205ENST00000508319 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 FABP5P3A8MUU1 101 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 B4DEV8 164 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 CRIP1P50238 77 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 LGALSLQ3ZCW2 172 aaPredicted RBP8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 AKR1C8PQ5T2L2 129 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 Q8N814 137 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 ZC2HC1AQ96GY0 325 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 SAMD10Q9BYL1 202 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 JPT2Q9H910 190 aa8.67□□□□□ -1.02
HMGCS1-205ENST00000508319 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 HAMPP81172 84 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 GAGE1Q13065 139 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 GAGE4Q13068 117 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 GAGE5Q13069 117 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 GAGE13Q4V321 117 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 DNLZQ5SXM8 178 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 COX8CQ7Z4L0 72 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 C14orf178Q8N769 122 aaPredicted RBP8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
HMGCS1-205ENST00000508319 CYTL1Q9NRR1 136 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms