RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 PNMA8CA0A1B0GUJ8 204 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 ZNF736B4DX44 427 aaPredicted RBP1.33□□□□□ -2.2
USP53-204ENST00000507906 FXYD1O00168 92 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 PDCD5O14737 125 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 RER1O15258 196 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 HIST1H2BKO60814 126 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 HYPMO75409 117 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 HIST1H2BJP06899 126 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 NBEAP1P0C6P0 100 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 S100A11P31949 105 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 RPL22P35268 128 aaKnown RBP1.33□□□□□ -2.2
USP53-204ENST00000507906 RBP2P50120 134 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 DCDP81605 110 aaKnown RBP1.33□□□□□ -2.2
USP53-204ENST00000507906 SCIMPQ6UWF3 145 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 Q6ZSA8 131 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 LRRC18Q8N456 261 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 OR5D14Q8NGL3 314 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 TMEM254Q8TBM7 123 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 ZNF431Q8TF32 576 aaPredicted RBP1.33□□□□□ -2.2
USP53-204ENST00000507906 THEM6Q8WUY1 208 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 PFDN5Q99471 154 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 TCEAL7Q9BRU2 100 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 OR2H1Q9GZK4 316 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 NAT8BQ9UHF3 227 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 RTTNQ86VV8 2226 aa1.33□□□□□ -2.2
USP53-204ENST00000507906 NCOA6Q14686 2063 aaPredicted RBP1.33□□□□□ -2.2
USP53-204ENST00000507906 ZNF831Q5JPB2 1677 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 TRAV5A0A0B4J249 113 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 LOC100130705A0A1B0GUX0 176 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 TCRBV4S1A1TA0A5B7 111 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 BBIP1A8MTZ0 92 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 M0R233 179 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 DLEU1O43261 78 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 LYRM1O43325 122 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 TPST1O60507 370 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 SPTBP11277 2137 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 HIST1H1BP16401 226 aaKnown RBP1.32□□□□□ -2.2
USP53-204ENST00000507906 ADCYAP1P18509 176 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 POLR2HP52434 150 aaKnown RBP1.32□□□□□ -2.2
USP53-204ENST00000507906 SMCO1Q147U7 214 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 SPRNQ5BIV9 151 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 TMEM128Q5BJH2 165 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 PYY3Q5JQD4 70 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 RPL13AP3Q6NVV1 102 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 KRTAP26-1Q6PEX3 210 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 HAGHLQ6PII5 290 aaPredicted RBP1.32□□□□□ -2.2
USP53-204ENST00000507906 PATE1Q8WXA2 126 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 RAB37Q96AX2 223 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 SCP2D1Q9UJQ7 156 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 TPRKBQ9Y3C4 175 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 LY96Q9Y6Y9 160 aa1.32□□□□□ -2.2
USP53-204ENST00000507906 DOCK11Q5JSL3 2073 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 HEATR5BQ9P2D3 2071 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 RP1P56715 2156 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 EXPH5Q8NEV8 1989 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 A0A087WX48 190 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 IGKV2-29A2NJV5 120 aaPredicted RBP1.31□□□□□ -2.2
USP53-204ENST00000507906 MCRIP1C9JLW8 97 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 E7EUB6 86 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 ZNF670-ZNF695F2Z2N8 137 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 ARPC5O15511 151 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 CST7O76096 145 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 APOC3P02656 99 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 SDC4P31431 198 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 DSCR4P56555 118 aaPredicted RBP1.31□□□□□ -2.2
USP53-204ENST00000507906 PKIAP61925 76 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 CDK6Q00534 326 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 DEFA5Q01523 94 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 EMX2Q04743 252 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 EIF3IQ13347 325 aaKnown RBP1.31□□□□□ -2.2
USP53-204ENST00000507906 PEA15Q15121 130 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 TMEM91Q6ZNR0 172 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 MAFIPQ8WZ33 124 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 OBSCN-AS1Q96MR7 158 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 CCDC115Q96NT0 180 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 PDCD10Q9BUL8 212 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 CDC42SE1Q9NRR8 79 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 KLK9Q9UKQ9 250 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 TRAPPC2LQ9UL33 140 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 LSM2Q9Y333 95 aaKnown RBP1.31□□□□□ -2.2
USP53-204ENST00000507906 MED31Q9Y3C7 131 aa1.31□□□□□ -2.2
USP53-204ENST00000507906 TNS1Q9HBL0 1735 aaKnown RBP1.31□□□□□ -2.2
USP53-204ENST00000507906 PCDH15Q96QU1 1955 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 SSC5DA1L4H1 1573 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 SCN3AQ9NY46 2000 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 PAPPA2Q9BXP8 1791 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 A0A096LPI6 279 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 TRAV10A0A0B4J240 114 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 TMEM218A2RU14 115 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 C5orf67F2Z3F1 127 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 K7EP13 123 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 APOC4-APOC2K7ER74 178 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 M0QZK8 103 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 SIX6O95475 246 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 IGF2P01344 180 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 APOC2P02655 101 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 TSPAN19P0C672 248 aa1.3□□□□□ -2.2
USP53-204ENST00000507906 KDELR1P24390 212 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms