RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 RASL10AQ92737 203 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 ISOC2Q96AB3 205 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 SEC11CQ9BY50 192 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 COL7A1Q02388 2944 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 H3BVH4 76 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 PPP1R2P9O14990 202 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 CIDEAO60543 219 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 ATP5G1P05496 136 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 RNASE3P12724 160 aaKnown RBP14.31□□□□□ -0.12
USP53-203ENST00000507597 RPL19P84098 196 aaKnown RBP14.31□□□□□ -0.12
USP53-203ENST00000507597 OR10G8Q8NGN5 311 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 MUC7Q8TAX7 377 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 SFRP2Q96HF1 295 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 C18orf15Q96N68 181 aa14.31□□□□□ -0.12
USP53-203ENST00000507597 HUWE1Q7Z6Z7 4374 aaKnown RBP14.3□□□□□ -0.12
USP53-203ENST00000507597 OR5AL1P0C617 328 aa14.3□□□□□ -0.12
USP53-203ENST00000507597 ZNF876PQ49A33 203 aa14.3□□□□□ -0.12
USP53-203ENST00000507597 ZFP82Q8N141 532 aa14.3□□□□□ -0.12
USP53-203ENST00000507597 LINC00612Q8N6U2 182 aa14.3□□□□□ -0.12
USP53-203ENST00000507597 FER1L6-AS1Q8NA97 138 aa14.3□□□□□ -0.12
USP53-203ENST00000507597 NUPR2A6NF83 97 aa14.29□□□□□ -0.12
USP53-203ENST00000507597 Q6ZTI0 123 aa14.29□□□□□ -0.12
USP53-203ENST00000507597 MRPL16Q9NX20 251 aaKnown RBP14.29□□□□□ -0.12
USP53-203ENST00000507597 KLK5Q9Y337 293 aaPredicted RBP14.29□□□□□ -0.12
USP53-203ENST00000507597 FAM231BA6NCW3 169 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 C3orf84H3BNL1 204 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 CACNG7P62955 275 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 SLAQ13239 276 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 SPANXN1Q5VSR9 72 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 Q6ZTC4 211 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 PHLDA1Q8WV24 401 aaPredicted RBP14.28□□□□□ -0.12
USP53-203ENST00000507597 BORCS7Q96B45 105 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 SSBP4Q9BWG4 385 aaPredicted RBP14.28□□□□□ -0.12
USP53-203ENST00000507597 SCRT2Q9NQ03 307 aa14.28□□□□□ -0.12
USP53-203ENST00000507597 TENM3Q9P273 2699 aa14.27□□□□□ -0.12
USP53-203ENST00000507597 DEFB131BA0A096LNP1 70 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 A8MWV9 139 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 SNAI2O43623 268 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 MT-ND4LP03901 98 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 ANAPC16Q96DE5 110 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 TPPP3Q9BW30 176 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 GFRA4Q9GZZ7 299 aa14.27□□□□□ -0.13
USP53-203ENST00000507597 TRAV4A0A0B4J268 109 aa14.26□□□□□ -0.13
USP53-203ENST00000507597 WDR73Q6P4I2 378 aa14.26□□□□□ -0.13
USP53-203ENST00000507597 OR4C5Q8NGB2 326 aa14.26□□□□□ -0.13
USP53-203ENST00000507597 TSKUQ8WUA8 353 aa14.26□□□□□ -0.13
USP53-203ENST00000507597 FAM210BQ96KR6 192 aa14.26□□□□□ -0.13
USP53-203ENST00000507597 M0R381 172 aa14.24□□□□□ -0.13
USP53-203ENST00000507597 IGLC6P0CF74 106 aa14.24□□□□□ -0.13
USP53-203ENST00000507597 HTN3P15516 51 aa14.24□□□□□ -0.13
USP53-203ENST00000507597 CEMP1Q6PRD7 247 aaPredicted RBP14.24□□□□□ -0.13
USP53-203ENST00000507597 F5H768 121 aa14.23□□□□□ -0.13
USP53-203ENST00000507597 GZMBP10144 247 aa14.23□□□□□ -0.13
USP53-203ENST00000507597 FOXA3P55318 350 aaPredicted RBP14.23□□□□□ -0.13
USP53-203ENST00000507597 ZNF575Q86XF7 245 aa14.23□□□□□ -0.13
USP53-203ENST00000507597 V9GYV3 84 aa14.23□□□□□ -0.13
USP53-203ENST00000507597 STAB2Q8WWQ8 2551 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 TRGV4A0A0C4DH28 118 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 RHODO00212 210 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 SMIM17P0DL12 118 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 TCTAP57738 103 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 DMRTA1Q5VZB9 504 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 SMIM15Q7Z3B0 74 aa14.22□□□□□ -0.13
USP53-203ENST00000507597 RS1O15537 224 aa14.21□□□□□ -0.13
USP53-203ENST00000507597 TRGC1P0CF51 173 aa14.21□□□□□ -0.13
USP53-203ENST00000507597 C10orf91Q5T1B1 145 aa14.21□□□□□ -0.13
USP53-203ENST00000507597 NAT8BQ9UHF3 227 aa14.21□□□□□ -0.13
USP53-203ENST00000507597 CARHSP1Q9Y2V2 147 aaKnown RBP14.21□□□□□ -0.13
USP53-203ENST00000507597 ADCYAP1P18509 176 aa14.2□□□□□ -0.14
USP53-203ENST00000507597 CTRLP40313 264 aa14.2□□□□□ -0.14
USP53-203ENST00000507597 ZFP2Q6ZN57 461 aa14.2□□□□□ -0.14
USP53-203ENST00000507597 OR10AG1Q8NH19 301 aa14.2□□□□□ -0.14
USP53-203ENST00000507597 AP1S3Q96PC3 154 aa14.2□□□□□ -0.14
USP53-203ENST00000507597 CTDSP1Q9GZU7 261 aa14.2□□□□□ -0.14
USP53-203ENST00000507597 IGHV4-4A0A075B6R2 117 aa14.19□□□□□ -0.14
USP53-203ENST00000507597 NXPH4O95158 308 aa14.19□□□□□ -0.14
USP53-203ENST00000507597 RNF212Q495C1 297 aa14.19□□□□□ -0.14
USP53-203ENST00000507597 CFAP126Q5VTH2 177 aa14.19□□□□□ -0.14
USP53-203ENST00000507597 HIGD1CA8MV81 97 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 IGHV3-53P01767 116 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 RIGQ13278 110 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 ZFAND6Q6FIF0 208 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 SVBPQ8N300 66 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 PGLYRP4Q96LB8 373 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 CNFNQ9BYD5 112 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 PRO0255Q9UI72 69 aa14.18□□□□□ -0.14
USP53-203ENST00000507597 A0A1B0GUT8 65 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 IGLL5B9A064 214 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 NTF3P20783 257 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 SSTP61278 116 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 TWIST1Q15672 202 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 C15orf53Q8NAA6 179 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 GTSF1Q8WW33 167 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 ZNF479Q96JC4 524 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 HHLA3Q9XRX5 114 aa14.17□□□□□ -0.14
USP53-203ENST00000507597 SMIM27A0A1W2PRY6 76 aa14.16□□□□□ -0.14
USP53-203ENST00000507597 H3BNG1 76 aa14.16□□□□□ -0.14
USP53-203ENST00000507597 SNAPINO95295 136 aa14.16□□□□□ -0.14
USP53-203ENST00000507597 RHEBQ15382 184 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms