RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
FGFR3-209ENST00000507588 IGKV3D-20A0A0C4DH25 116 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 EREGO14944 169 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 ARPC5O15511 151 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 IFNA7P01567 189 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 UBE2G2P60604 165 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 PIK3CD-AS1Q5SR53 167 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 PRADC1Q9BSG0 188 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
FGFR3-209ENST00000507588 TRAV34A0A0B4J273 112 aa12.64□□□□□ -0.39
FGFR3-209ENST00000507588 CRYGDP07320 174 aa12.64□□□□□ -0.39
FGFR3-209ENST00000507588 MGST1P10620 155 aaKnown RBP12.64□□□□□ -0.39
FGFR3-209ENST00000507588 FGF8P55075 233 aaPredicted RBP12.64□□□□□ -0.39
FGFR3-209ENST00000507588 LINC01556Q5JQF7 62 aa12.64□□□□□ -0.39
FGFR3-209ENST00000507588 CYTL1Q9NRR1 136 aa12.64□□□□□ -0.39
FGFR3-209ENST00000507588 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
FGFR3-209ENST00000507588 A0A087WTM6 91 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 IGHV3-38A0A0C4DH36 116 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 MAP1LC3B2A6NCE7 125 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 COX8CQ7Z4L0 72 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 Q8N1X5 172 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
FGFR3-209ENST00000507588 TCEAL7Q9BRU2 100 aa12.62□□□□□ -0.39
FGFR3-209ENST00000507588 PARLQ9H300 379 aa12.62□□□□□ -0.39
FGFR3-209ENST00000507588 IL36BQ9NZH7 164 aa12.62□□□□□ -0.39
FGFR3-209ENST00000507588 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 A8MWV9 139 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 S100A4P26447 101 aaKnown RBP12.61□□□□□ -0.39
FGFR3-209ENST00000507588 ASIPP42127 132 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 ZNF345Q14585 488 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 ZFP2Q6ZN57 461 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 ZFP30Q9Y2G7 519 aa12.61□□□□□ -0.39
FGFR3-209ENST00000507588 LINC00694P0DN24 101 aa12.6□□□□□ -0.39
FGFR3-209ENST00000507588 FHITP49789 147 aa12.6□□□□□ -0.39
FGFR3-209ENST00000507588 LELP1Q5T871 98 aa12.6□□□□□ -0.39
FGFR3-209ENST00000507588 ZC2HC1AQ96GY0 325 aa12.6□□□□□ -0.39
FGFR3-209ENST00000507588 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
FGFR3-209ENST00000507588 TRAV8-6A0A0B4J262 113 aa12.59□□□□□ -0.39
FGFR3-209ENST00000507588 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
FGFR3-209ENST00000507588 B4DEV8 164 aa12.59□□□□□ -0.39
FGFR3-209ENST00000507588 CRIP1P50238 77 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 UBE2G1P62253 170 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 OR10J3Q5JRS4 329 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 UFSP1Q6NVU6 142 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 KCNRGQ8N5I3 272 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 ATP6V0E2Q8NHE4 81 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
FGFR3-209ENST00000507588 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
FGFR3-209ENST00000507588 KRBOX1C9JBD0 128 aa12.57□□□□□ -0.4
FGFR3-209ENST00000507588 SMLR1H3BR10 107 aa12.57□□□□□ -0.4
FGFR3-209ENST00000507588 H3BVH4 76 aa12.57□□□□□ -0.4
FGFR3-209ENST00000507588 FAT1Q14517 4588 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 SH2D1AO60880 128 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 LTAP01374 205 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 SEC11BP0C7V7 166 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
FGFR3-209ENST00000507588 ZNF674Q2M3X9 581 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 LGALSLQ3ZCW2 172 aaPredicted RBP12.56□□□□□ -0.4
FGFR3-209ENST00000507588 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 FAM162BQ5T6X4 162 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 Q6ZSN1 163 aa12.56□□□□□ -0.4
FGFR3-209ENST00000507588 HMSDA8MTL9 139 aa12.55□□□□□ -0.4
FGFR3-209ENST00000507588 RHODO00212 210 aa12.55□□□□□ -0.4
FGFR3-209ENST00000507588 LAGE3Q14657 143 aa12.55□□□□□ -0.4
FGFR3-209ENST00000507588 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
FGFR3-209ENST00000507588 SCRT2Q9NQ03 307 aa12.55□□□□□ -0.4
FGFR3-209ENST00000507588 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 M0R036 132 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 CST9LP1Q5W188 147 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 MBD3L1Q8WWY6 194 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 JPT2Q9H910 190 aa12.54□□□□□ -0.4
FGFR3-209ENST00000507588 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
FGFR3-209ENST00000507588 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
FGFR3-209ENST00000507588 AKR1C3P42330 323 aa12.53□□□□□ -0.4
FGFR3-209ENST00000507588 OR11H4Q8NGC9 324 aa12.53□□□□□ -0.4
FGFR3-209ENST00000507588 SAMD10Q9BYL1 202 aa12.53□□□□□ -0.4
FGFR3-209ENST00000507588 A0A0D9SG52 128 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 BCL2L11O43521 198 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 PSCAO43653 123 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 PAGE4O60829 102 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 GAGE1Q13065 139 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 GAGE4Q13068 117 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 GAGE5Q13069 117 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
FGFR3-209ENST00000507588 GRIFINA4D1Z8 144 aa12.51□□□□□ -0.41
FGFR3-209ENST00000507588 IGHV3-30P01768 117 aa12.51□□□□□ -0.41
FGFR3-209ENST00000507588 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
FGFR3-209ENST00000507588 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
FGFR3-209ENST00000507588 IGHV3-30-5P0DP03 117 aa12.51□□□□□ -0.41
FGFR3-209ENST00000507588 TPT1P13693 172 aaKnown RBP12.51□□□□□ -0.41
FGFR3-209ENST00000507588 XGP55808 180 aa12.51□□□□□ -0.41
FGFR3-209ENST00000507588 KRTAP10-1P60331 282 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms