RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 LINC00479Q96M42 142 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 ARL2-SNX15V9GYD0 113 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 TRAV34A0A0B4J273 112 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 MAP1LC3B2A6NCE7 125 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 SMLR1H3BR10 107 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 PEX7O00628 323 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 CIDEAO60543 219 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 FGF8P55075 233 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 TIRAPP58753 221 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 UBE2G2P60604 165 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 ZNF876PQ49A33 203 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 COX8CQ7Z4L0 72 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 Q86TA4 180 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 KCNRGQ8N5I3 272 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 PCNPQ8WW12 178 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 TXNDC17Q9BRA2 123 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 NKX6-2Q9C056 277 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 MAP1LC3BQ9GZQ8 125 aa6.17□□□□□ -1.42
PDLIM5-209ENST00000506632 TRBV6-4A0A1B0GX49 114 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 HMSDA8MTL9 139 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 K7EP13 123 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 CDK2AP2O75956 126 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 IFNA7P01567 189 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 DNAH10OSP0CZ25 163 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 PPT1P50897 306 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 ZNF506Q5JVG8 444 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 PIK3CD-AS1Q5SR53 167 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 SH2D6Q7Z4S9 175 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 SPATA12Q7Z6I5 190 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 WFDC10BQ8IUB3 73 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 SLC25A29Q8N8R3 303 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 OR11H4Q8NGC9 324 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
PDLIM5-209ENST00000506632 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 FABP5P3A8MUU1 101 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 SEC11BP0C7V7 166 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 FHITP49789 147 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 CRIP1P50238 77 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 DNLZQ5SXM8 178 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 TCEAL7Q9BRU2 100 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 ZFP30Q9Y2G7 519 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 TNFRSF18Q9Y5U5 241 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 LY96Q9Y6Y9 160 aa6.15□□□□□ -1.42
PDLIM5-209ENST00000506632 HSPG2P98160 4391 aa6.15□□□□□ -1.43
PDLIM5-209ENST00000506632 RHOHQ15669 191 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 MBD3L1Q8WWY6 194 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 ZC2HC1AQ96GY0 325 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 FMC1Q96HJ9 113 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 PARLQ9H300 379 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 IL36BQ9NZH7 164 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 DNAH5Q8TE73 4624 aa6.14□□□□□ -1.43
PDLIM5-209ENST00000506632 TRAV9-2A0A087WT02 112 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 A0A0D9SG52 128 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 B4DEV8 164 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 UMAD1C9J7I0 102 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 KRBOX1C9JBD0 128 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 BCL2L11O43521 198 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 TNFRSF6BO95407 300 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 LTAP01374 205 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 LINC00694P0DN24 101 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 MGST1P10620 155 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 EVI2AP22794 236 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 ASIPP42127 132 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 ZFP2Q6ZN57 461 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 NFE4Q86UQ8 179 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 NHLRC2Q8NBF2 726 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 STOML3Q8TAV4 291 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 C1orf43Q9BWL3 253 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
PDLIM5-209ENST00000506632 IGHV3-73A0A0B4J1V6 119 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 A8MWV9 139 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 PAGE4O60829 102 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 SH2D1AO60880 128 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 S100A4P26447 101 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 UBE2G1P62253 170 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 LINC01556Q5JQF7 62 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 CST9LP1Q5W188 147 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 Q6ZSN1 163 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 ZNF471Q9BX82 626 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 SCRT2Q9NQ03 307 aa6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 APOBP04114 4563 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-209ENST00000506632 IGHV3-38A0A0C4DH36 116 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 H3BVH4 76 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 CRYGDP07320 174 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 AKR1C3P42330 323 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 ERVFC1-1P60608 527 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 FAM162BQ5T6X4 162 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms