RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ALKAL2Q6UX46 152 aa5.12□□□□□ -1.59
GYPB-206ENST00000506516 COX8CQ7Z4L0 72 aa5.12□□□□□ -1.59
GYPB-206ENST00000506516 Q86TA4 180 aa5.12□□□□□ -1.59
GYPB-206ENST00000506516 C15orf53Q8NAA6 179 aa5.12□□□□□ -1.59
GYPB-206ENST00000506516 RYR2Q92736 4967 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 IGHV3-16A0A0C4DH30 117 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 M0R2P5 195 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 NUDT3O95989 172 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 LTAP01374 205 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 S100A4P26447 101 aaKnown RBP5.11□□□□□ -1.59
GYPB-206ENST00000506516 MEF2BQ02080 365 aaPredicted RBP5.11□□□□□ -1.59
GYPB-206ENST00000506516 FAM162BQ5T6X4 162 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 BAGE2Q86Y30 109 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 RASL10AQ92737 203 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 ZC2HC1AQ96GY0 325 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 MRPL16Q9NX20 251 aaKnown RBP5.11□□□□□ -1.59
GYPB-206ENST00000506516 VAX2Q9UIW0 290 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 HYDINQ4G0P3 5121 aa5.11□□□□□ -1.59
GYPB-206ENST00000506516 TRAV26-1A0A087WT03 109 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 B4DEV8 164 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 BCL2P10415 239 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 HOXA5P20719 270 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 RPL35P42766 123 aaKnown RBP5.1□□□□□ -1.59
GYPB-206ENST00000506516 CRIP1P50238 77 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 ZNF674Q2M3X9 581 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 RNF212Q495C1 297 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 UBE2DNLQ8IWF7 75 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 OR4C5Q8NGB2 326 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 C11orf52Q96A22 123 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 MED9Q9NWA0 146 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 C11orf21Q9P2W6 132 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 HHLA3Q9XRX5 114 aa5.1□□□□□ -1.59
GYPB-206ENST00000506516 IGKV3D-20A0A0C4DH25 116 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 TRGV4A0A0C4DH28 118 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 A0A0J9YY99 117 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 KRBOX1C9JBD0 128 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 C9JCJ5 164 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 H3BNG1 76 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 M0R036 132 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 CIDEAO60543 219 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 SH2D1AO60880 128 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 IGHV3-53P01767 116 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 ASIPP42127 132 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 GNG4P50150 75 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 CCL18P55774 89 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 ZNF876PQ49A33 203 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 POM121L12Q8N7R1 296 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 PTH2Q96A98 100 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 DAZAP1Q96EP5 407 aaKnown RBP5.09□□□□□ -1.59
GYPB-206ENST00000506516 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 BIN3Q9NQY0 253 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 PRO0255Q9UI72 69 aa5.09□□□□□ -1.59
GYPB-206ENST00000506516 DNAH1Q9P2D7 4330 aa5.09□□□□□ -1.6
GYPB-206ENST00000506516 TRAV4A0A0B4J268 109 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 RBFOX3A6NFN3 312 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 MGST1P10620 155 aaKnown RBP5.08□□□□□ -1.6
GYPB-206ENST00000506516 RNASE3P12724 160 aaKnown RBP5.08□□□□□ -1.6
GYPB-206ENST00000506516 DNLZQ5SXM8 178 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 TEX261Q6UWH6 196 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 NHLRC2Q8NBF2 726 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 LYPD6BQ8NI32 183 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 SMIM12Q96EX1 92 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 C9orf85Q96MD7 179 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 EIF5A2Q9GZV4 153 aaKnown RBP5.08□□□□□ -1.6
GYPB-206ENST00000506516 IL36BQ9NZH7 164 aa5.08□□□□□ -1.6
GYPB-206ENST00000506516 ALMS1Q8TCU4 4167 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 TMSB15BA0A087X1C1 80 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 RAB19A4D1S5 217 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 PGPEP1LA6NFU8 196 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 A8MWV9 139 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 B5MCH6 92 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 SFTA3P0C7M3 94 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 ARMS2P0C7Q2 107 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 MALP21145 153 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 CRYBA4P53673 196 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 FAM3BP58499 235 aaPredicted RBP5.07□□□□□ -1.6
GYPB-206ENST00000506516 FHL2Q14192 279 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 CENPWQ5EE01 88 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 PRR27Q6MZM9 219 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 ZNF479Q96JC4 524 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 DERL1Q9BUN8 251 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 PHLDA3Q9Y5J5 127 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
GYPB-206ENST00000506516 TMEM250H0YL14 139 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 H3BVH4 76 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 RS1O15537 224 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 NDUFS6O75380 124 aaKnown RBP5.06□□□□□ -1.6
GYPB-206ENST00000506516 CXCL1P09341 107 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 MRPL23Q16540 153 aaKnown RBP5.06□□□□□ -1.6
GYPB-206ENST00000506516 ZNF506Q5JVG8 444 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 CFAP126Q5VTH2 177 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 PCNPQ8WW12 178 aaKnown RBP5.06□□□□□ -1.6
GYPB-206ENST00000506516 VSIG2Q96IQ7 327 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 ICOSQ9Y6W8 199 aa5.06□□□□□ -1.6
GYPB-206ENST00000506516 A0A096LPF7 62 aa5.05□□□□□ -1.6
GYPB-206ENST00000506516 XKRY2A2RUG3 117 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms