RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 NDUFB6O95139 128 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 IGLV3-19P01714 112 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 PIRTP0C851 137 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 ADCYAP1P18509 176 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 C1orf137Q5JT78 98 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 KRTAP26-1Q6PEX3 210 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 DYNLRB2Q8TF09 96 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 ZNF431Q8TF32 576 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-215ENST00000506510 MROH2AA6NES4 1674 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 C3P01024 1663 aa2.41□□□□□ -2.02
PDE4D-215ENST00000506510 ZNF142P52746 1687 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-215ENST00000506510 ABCA6Q8N139 1617 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 A0A1W2PRS3 328 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 FREM3P0C091 2139 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 PIPP12273 146 aaPredicted RBP2.4□□□□□ -2.03
PDE4D-215ENST00000506510 BRS3P32247 399 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 NUMA1Q14980 2115 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 SPACA4Q8TDM5 124 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 C10orf105Q8TEF2 133 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 TVP23CQ96ET8 276 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 RTEL1-TNFRSF6BF6WH68 1400 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 TROQ12816 1431 aaPredicted RBP2.4□□□□□ -2.03
PDE4D-215ENST00000506510 EEA1Q15075 1411 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 ALPK3Q96L96 1907 aa2.4□□□□□ -2.03
PDE4D-215ENST00000506510 MYO5CQ9NQX4 1742 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 CPS1P31327 1500 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 ABCC1P33527 1531 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 CDK13Q14004 1512 aaKnown RBP2.39□□□□□ -2.03
PDE4D-215ENST00000506510 MYLKQ15746 1914 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 TRAV14DV4A0A0A6YYC5 116 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 GYPBP06028 91 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 NPC2P61916 151 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 CNBPP62633 177 aaKnown RBP2.39□□□□□ -2.03
PDE4D-215ENST00000506510 PLXNC1O60486 1568 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 CEP170BQ9Y4F5 1589 aaPredicted RBP2.39□□□□□ -2.03
PDE4D-215ENST00000506510 COL24A1Q17RW2 1714 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 MICAL3Q7RTP6 2002 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 KIF14Q15058 1648 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 ALKQ9UM73 1620 aa2.39□□□□□ -2.03
PDE4D-215ENST00000506510 KIDINS220Q9ULH0 1771 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 ARHGAP5Q13017 1502 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 TRAV2A0A0B4J234 112 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 SPANXN1Q5VSR9 72 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 NRKQ7Z2Y5 1582 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 SAMD9LQ8IVG5 1584 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 OR10AG1Q8NH19 301 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 AQP10Q96PS8 301 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 NDUFA12Q9UI09 145 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 PREX2Q70Z35 1606 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 MYO3AQ8NEV4 1616 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 MED14O60244 1454 aa2.38□□□□□ -2.03
PDE4D-215ENST00000506510 ITSN2Q9NZM3 1697 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 INO80Q9ULG1 1556 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-215ENST00000506510 CLIP1P30622 1438 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 TCRBV3S1A0A5B6 114 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 TMEM262E9PQX1 116 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-215ENST00000506510 C4orf3Q8WVX3 66 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 DSCR8Q96T75 97 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 DEPDC5O75140 1603 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 ARHGAP35Q9NRY4 1499 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 SHANK2Q9UPX8 1470 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 ATP7AQ04656 1500 aa2.37□□□□□ -2.03
PDE4D-215ENST00000506510 VWDEQ8N2E2 1590 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 TRAV17A0A0B4J275 112 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 FAM24AA6NFZ4 105 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 F8W1H4 67 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 H3BRN7 92 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 Q8N8P6 123 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 TSKUQ8WUA8 353 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 TMEM141Q96I45 108 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 Q9H521 79 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 PXDNLA1KZ92 1463 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 PLEKHH2Q8IVE3 1493 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 AKAP11Q9UKA4 1901 aa2.36□□□□□ -2.03
PDE4D-215ENST00000506510 COL11A1P12107 1806 aaPredicted RBP2.35□□□□□ -2.03
PDE4D-215ENST00000506510 CASKIN1Q8WXD9 1431 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 CCDC18Q5T9S5 1454 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 NLRP1Q9C000 1473 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 POLR1AO95602 1720 aaPredicted RBP2.35□□□□□ -2.03
PDE4D-215ENST00000506510 CDC42BPAQ5VT25 1732 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 PRB4P10163 310 aaPredicted RBP2.35□□□□□ -2.03
PDE4D-215ENST00000506510 COX7CP15954 63 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 POLR2JP52435 117 aaKnown RBP2.35□□□□□ -2.03
PDE4D-215ENST00000506510 RHOHQ15669 191 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 LRRC7Q96NW7 1537 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 SYCP2Q9BX26 1530 aa2.35□□□□□ -2.03
PDE4D-215ENST00000506510 RNF17Q9BXT8 1623 aaKnown RBP2.35□□□□□ -2.03
PDE4D-215ENST00000506510 CLTCQ00610 1675 aaKnown RBP2.34□□□□□ -2.03
PDE4D-215ENST00000506510 SHROOM3Q8TF72 1996 aa2.34□□□□□ -2.03
PDE4D-215ENST00000506510 LRRIQ1Q96JM4 1722 aa2.34□□□□□ -2.03
PDE4D-215ENST00000506510 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.34□□□□□ -2.03
PDE4D-215ENST00000506510 FYCO1Q9BQS8 1478 aa2.34□□□□□ -2.03
PDE4D-215ENST00000506510 KDM5DQ9BY66 1539 aa2.34□□□□□ -2.03
PDE4D-215ENST00000506510 ZSWIM8A7E2V4 1837 aa2.34□□□□□ -2.03
PDE4D-215ENST00000506510 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
PDE4D-215ENST00000506510 CCL16O15467 120 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms