RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 C9orf47Q6ZRZ4 202 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF709Q8N972 641 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 C5orf17Q8NAS9 161 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 AGRNO00468 2067 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 AKAP6Q13023 2319 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 C1orf196B1AJZ1 125 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 NCR2O95944 276 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 GPR183P32249 361 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 GNG4P50150 75 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 LYZP61626 148 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 NRACQ8N912 160 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 SELENOKQ9Y6D0 94 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 ABCA1O95477 2261 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 SPTA1P02549 2419 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 TRAV41A0A0B4J266 112 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 IGHV3-66A0A0C4DH42 116 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF705DP0CH99 300 aaPredicted RBP4.3□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF705BP0CI00 300 aaPredicted RBP4.3□□□□□ -1.72
SCLT1-207ENST00000506233 PRSS57Q6UWY2 283 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 NXPH4O95158 308 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 RNASE3P12724 160 aaKnown RBP4.3□□□□□ -1.72
SCLT1-207ENST00000506233 TCL1AP56279 114 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 GOLT1AQ6ZVE7 132 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 RASL11BQ9BPW5 248 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 PSG8Q9UQ74 426 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 RBAKDNA6NC62 111 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 SMR3AQ99954 134 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 Q9UF83 564 aa4.3□□□□□ -1.72
SCLT1-207ENST00000506233 CACNA1BQ00975 2339 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 KLLNB2CW77 178 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 SH2D1AO60880 128 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 HSBP1O75506 76 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 IFNA1P01562 189 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 TRGV3P03979 118 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 LCN12Q6JVE5 192 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 RASL11AQ6T310 242 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 RPP21Q9H633 154 aaKnown RBP4.29□□□□□ -1.72
SCLT1-207ENST00000506233 NCBP2LA6PVI3 153 aaKnown RBP4.29□□□□□ -1.72
SCLT1-207ENST00000506233 SPINK4O60575 86 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 FABP4P15090 132 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 OR10D4PQ8NGN7 298 aa4.29□□□□□ -1.72
SCLT1-207ENST00000506233 IGHV1-24A0A0C4DH33 117 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 F6UB75 175 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 SUB1P53999 127 aaKnown RBP eCLIP4.28□□□□□ -1.725e-7■■■■■ 33
SCLT1-207ENST00000506233 RAB5BP61020 215 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 OR10J3Q5JRS4 329 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 S100A7AQ86SG5 101 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 ENY2Q9NPA8 101 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF256Q9Y2P7 627 aaPredicted RBP4.28□□□□□ -1.72
SCLT1-207ENST00000506233 FAM223BA6NKX1 122 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 B4DSR2 109 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 H3BUA1 57 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF138P52744 262 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 LOC102724200A0A096LPH7 203 aaPredicted RBP4.28□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF207O43670 478 aaKnown RBP4.28□□□□□ -1.72
SCLT1-207ENST00000506233 PMCHL1Q16048 86 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 Q6AWC8 147 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 FAM19A1Q7Z5A9 133 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 NDFIP1Q9BT67 221 aa4.28□□□□□ -1.72
SCLT1-207ENST00000506233 MAST4O15021 2626 aa4.28□□□□□ -1.73
SCLT1-207ENST00000506233 PRM2P04554 102 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 CRISP2P16562 243 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 LY6EQ16553 131 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 ECSCRQ19T08 205 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 UNQ5815/PRO19632Q6UWF5 114 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 C22orf15Q8WYQ4 148 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 TRAPPC1Q9Y5R8 145 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 A0A087WW49 117 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 FAM181BA6NEQ2 426 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 FGF6P10767 208 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 C1orf194Q5T5A4 169 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 TEP1Q99973 2627 aaKnown RBP4.27□□□□□ -1.73
SCLT1-207ENST00000506233 WNK2Q9Y3S1 2297 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 IGHV3OR16-13A0A075B7E8 117 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 IGHV3-49A0A0A0MS15 119 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 IGHV3-74A0A0B4J1X5 117 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 NDUFA4O00483 81 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 TAS2R45P59539 299 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 TAL2Q16559 108 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 ATP5L2Q7Z4Y8 100 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
SCLT1-207ENST00000506233 PLAC8L1A1L4L8 177 aa4.26□□□□□ -1.73
SCLT1-207ENST00000506233 FABP1P07148 127 aa4.26□□□□□ -1.73
SCLT1-207ENST00000506233 SLC25A16P16260 332 aa4.26□□□□□ -1.73
SCLT1-207ENST00000506233 MRPL54Q6P161 138 aaKnown RBP4.26□□□□□ -1.73
SCLT1-207ENST00000506233 TRAV30A0A087WSZ9 112 aa4.26□□□□□ -1.73
SCLT1-207ENST00000506233 S100A8P05109 93 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms