RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 IFITM5A6NNB3 132 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 JMJD7-PLA2G4BH0Y9G9 81 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 EDF1O60869 148 aaKnown RBP0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 SMIM24O75264 130 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CD3DP04234 171 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 HMGN1P05114 100 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CD14P08571 375 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 MPC1LP0DKB6 136 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 HLA-DRB4P13762 266 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 KDELR1P24390 212 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CKS2P33552 79 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 AKR1D1P51857 326 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 PCBD1P61457 104 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 HIST1H1AQ02539 215 aaPredicted RBP0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CCSMST1Q4G0I0 132 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 TMEM91Q6ZNR0 172 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 LINC00299Q6ZSB3 139 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 OTOSQ8NHW6 89 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 SMIM3Q9BZL3 60 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 LPAR5Q9H1C0 372 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 SLC35B3Q9H1N7 401 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 TNFSF18Q9UNG2 199 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 HLA-DRB4X5D2U9 266 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 ZANQ9Y493 2812 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 PTPRGP23470 1445 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 TEX15Q9BXT5 2789 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 ZGRF1Q86YA3 2104 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 ERCC6Q03468 1493 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CNTRLQ7Z7A1 2325 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 SPTAN1Q13813 2472 aaKnown RBP0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 ZNF142P52746 1687 aaPredicted RBP0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 AFDNP55196 1824 aaKnown RBP0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 IGHV1-24A0A0C4DH33 117 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 LOC107984156A0A0G2JMH3 177 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 A0A0J9YY99 117 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 BBIP1A8MTZ0 92 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 NCR3O14931 201 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 KLF7O75840 302 aaPredicted RBP0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 IGLV3-1P01715 115 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 TSPAN19P0C672 248 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 COX4I1P13073 169 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 EVI2AP22794 236 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 DNAJB13P59910 316 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 GLYATL3Q5SZD4 288 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 DEFB132Q7Z7B7 95 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 ARL17AQ8IVW1 177 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 OR8J3Q8NGG0 315 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 TCEAL4Q96EI5 215 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 SMIM7Q9BQ49 75 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 LIMD2Q9BT23 127 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 WFDC10AQ9H1F0 79 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 COMMD3Q9UBI1 195 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 DNAJC15Q9Y5T4 150 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 DISP2A7MBM2 1401 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 MYOM3Q5VTT5 1437 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 ADGRB1O14514 1584 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 PEG3Q9GZU2 1588 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 PCNX1Q96RV3 2341 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 PIEZO2Q9H5I5 2752 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 UHRF1BP1LA0JNW5 1464 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 IQSEC2Q5JU85 1478 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 DLEC1Q9Y238 1755 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 AKAP11Q9UKA4 1901 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 NINQ8N4C6 2090 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 RNF213Q63HN8 5207 aa0.6□□□□□ -2.31
TOPBP1-204ENST00000505804 TET1Q8NFU7 2136 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 MYH9P35579 1960 aaKnown RBP0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 RREB1Q92766 1687 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 CFAP54Q96N23 3096 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 BRCA2P51587 3418 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 BCORL1Q5H9F3 1711 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 PDZD2O15018 2839 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 A0A1W2PPB8 328 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 A0A1W2PRS3 328 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 KIR3DP1A8MWS1 328 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 M0R2Z0 102 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 SULT1C4O75897 302 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 NCR2O95944 276 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 RBP4P02753 201 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 IGLC6P0CF74 106 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 ADCYAP1P18509 176 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 PDE6GP18545 87 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 PLGLB1Q02325 96 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 SPATA45Q537H7 98 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 C3orf62Q6ZUJ4 267 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 SBSPONQ8IVN8 264 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 CTAGE3PQ8IX95 158 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 C10orf111Q8N326 155 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 MMGT1Q8N4V1 131 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 TCTEX1D1Q8N7M0 179 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 C5orf17Q8NAS9 161 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 TSTD1Q8NFU3 115 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 OR10AC1Q8NH08 325 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 PFDN5Q99471 154 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 FAM107BQ9H098 131 aa0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 PAIP2BQ9ULR5 123 aaKnown RBP0.59□□□□□ -2.31
TOPBP1-204ENST00000505804 USP9YO00507 2555 aaPredicted RBP0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 LAMB1P07942 1786 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms