RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 DNAJC30Q96LL9 226 aa3.87□□□□□ -1.79
GYPB-205ENST00000505583 SGK494Q96LW2 274 aa3.87□□□□□ -1.79
GYPB-205ENST00000505583 RPH3ALQ9UNE2 315 aa3.87□□□□□ -1.79
GYPB-205ENST00000505583 LRP1Q07954 4544 aaKnown RBP3.86□□□□□ -1.79
GYPB-205ENST00000505583 FAM240BA0A1B0GVZ2 78 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 PGPA6NDG6 321 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
GYPB-205ENST00000505583 HMGB3O15347 200 aaKnown RBP3.86□□□□□ -1.79
GYPB-205ENST00000505583 H2BFSP57053 126 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 ZNF876PQ49A33 203 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 OR10J3Q5JRS4 329 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 FFAR4Q5NUL3 377 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 CFAP126Q5VTH2 177 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 GOLT1AQ6ZVE7 132 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 TMED6Q8WW62 240 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 SMIM3Q9BZL3 60 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 WFDC1Q9HC57 220 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 OTORQ9NRC9 128 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 MBD2Q9UBB5 411 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 LENEPQ9Y5L5 61 aa3.86□□□□□ -1.79
GYPB-205ENST00000505583 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.85□□□□□ -1.79
GYPB-205ENST00000505583 TRAV8-6A0A0B4J262 113 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 TRAV21A0A0B4J279 112 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 TRBV6-4A0A1B0GX49 114 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 FBLL1A6NHQ2 334 aaKnown RBP3.85□□□□□ -1.79
GYPB-205ENST00000505583 RS1O15537 224 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 C1QBP02746 253 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 KHDC3LQ587J8 217 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 LELP1Q5T871 98 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 SCXQ7RTU7 201 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 SH2D6Q7Z4S9 175 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 DAZ4Q86SG3 579 aaKnown RBP3.85□□□□□ -1.79
GYPB-205ENST00000505583 SYT8Q8NBV8 401 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 ASB13Q8WXK3 278 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 C9orf85Q96MD7 179 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 ATP5SQ99766 215 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 NMES1Q9C002 83 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 SDF2L1Q9HCN8 221 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 TREM1Q9NP99 234 aa3.85□□□□□ -1.79
GYPB-205ENST00000505583 DAZ3Q9NR90 486 aaKnown RBP3.85□□□□□ -1.79
GYPB-205ENST00000505583 C17orf112F2Z3M2 114 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 IGLV2-11P01706 119 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 PFN1P07737 140 aaKnown RBP3.84□□□□□ -1.79
GYPB-205ENST00000505583 LINC00694P0DN24 101 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 RNASE3P12724 160 aaKnown RBP3.84□□□□□ -1.79
GYPB-205ENST00000505583 RAB2AP61019 212 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 IFITM3Q01628 133 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 ASAH1Q13510 395 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 LAGE3Q14657 143 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 RHOHQ15669 191 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 ZNF506Q5JVG8 444 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 ATP6V0E2Q8NHE4 81 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 CMTM2Q8TAZ6 248 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 PPP1R1CQ8WVI7 109 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 BAALCQ8WXS3 180 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 CCDC32Q9BV29 185 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 SAMD10Q9BYL1 202 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 CTDSP1Q9GZU7 261 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 GTSF1LQ9H1H1 148 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 JPT2Q9H910 190 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 KCNIP2Q9NS61 270 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 HSPB11Q9Y547 144 aa3.84□□□□□ -1.79
GYPB-205ENST00000505583 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.8
GYPB-205ENST00000505583 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 IGKV3D-20A0A0C4DH25 116 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 MPC2O95563 127 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 GCGP01275 180 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 TCRAP04437 139 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 ARL14EPLP0DKL9 152 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 TAS2R45P59539 299 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 GAGE1Q13065 139 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 GAGE4Q13068 117 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 GAGE5Q13069 117 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 C14orf178Q8N769 122 aaPredicted RBP3.83□□□□□ -1.8
GYPB-205ENST00000505583 OR2T35Q8NGX2 323 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 DEFB104AQ8WTQ1 72 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 KCNS1Q96KK3 526 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 PARLQ9H300 379 aa3.83□□□□□ -1.8
GYPB-205ENST00000505583 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 GGTLC3B5MD39 225 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 NPSP0C0P6 89 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 MGST1P10620 155 aaKnown RBP3.82□□□□□ -1.8
GYPB-205ENST00000505583 RPL12P30050 165 aaKnown RBP3.82□□□□□ -1.8
GYPB-205ENST00000505583 HNRNPA3P51991 378 aaKnown RBP3.82□□□□□ -1.8
GYPB-205ENST00000505583 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 UFSP1Q6NVU6 142 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 PRNTQ86SH4 94 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 CIRBP-AS1Q8TBR5 109 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 ENKURQ8TC29 256 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 LINC00479Q96M42 142 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 TM2D2Q9BX73 214 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 PSG8Q9UQ74 426 aa3.82□□□□□ -1.8
GYPB-205ENST00000505583 TRAV8-3A0A0A6YYJ7 113 aa3.81□□□□□ -1.8
GYPB-205ENST00000505583 TRAV34A0A0B4J273 112 aa3.81□□□□□ -1.8
GYPB-205ENST00000505583 A0A1W2PPV4 95 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms