RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 GCSHP23434 173 aa13.43□□□□□ -0.26
UBE2D3-220ENST00000505307 XGP55808 180 aa13.43□□□□□ -0.26
UBE2D3-220ENST00000505307 ZNF506Q5JVG8 444 aa13.43□□□□□ -0.26
UBE2D3-220ENST00000505307 LELP1Q5T871 98 aa13.43□□□□□ -0.26
UBE2D3-220ENST00000505307 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 RNASE3P12724 160 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 KRTAP10-1P60331 282 aa13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 ZFP2Q6ZN57 461 aa13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 NTN5Q8WTR8 489 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 NKX6-2Q9C056 277 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
UBE2D3-220ENST00000505307 A8MWV9 139 aa13.41□□□□□ -0.26
UBE2D3-220ENST00000505307 S100A4P26447 101 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-220ENST00000505307 ATP6V0E2Q8NHE4 81 aa13.41□□□□□ -0.26
UBE2D3-220ENST00000505307 IGHV3-73A0A0B4J1V6 119 aa13.4□□□□□ -0.26
UBE2D3-220ENST00000505307 CTXND1A0A1B0GTU2 59 aa13.4□□□□□ -0.26
UBE2D3-220ENST00000505307 FABP5P3A8MUU1 101 aa13.4□□□□□ -0.26
UBE2D3-220ENST00000505307 IFNA7P01567 189 aa13.4□□□□□ -0.26
UBE2D3-220ENST00000505307 Q5BKY6 102 aa13.4□□□□□ -0.26
UBE2D3-220ENST00000505307 RPL7L1Q6DKI1 246 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-220ENST00000505307 LAGE3Q14657 143 aa13.39□□□□□ -0.27
UBE2D3-220ENST00000505307 FRZBQ92765 325 aa13.39□□□□□ -0.27
UBE2D3-220ENST00000505307 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 LRCOL1A6NCL2 159 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 RNF222A6NCQ9 220 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 ASIPP42127 132 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 PARLQ9H300 379 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 ARL2-SNX15V9GYD0 113 aa13.38□□□□□ -0.27
UBE2D3-220ENST00000505307 FXYD6-FXYD2A0A087WZ82 144 aa13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 IGLV5-52A0A0A0MRZ9 124 aa13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 TRAV34A0A0B4J273 112 aa13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 LGALSLQ3ZCW2 172 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 LINC00479Q96M42 142 aa13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 TM2D2Q9BX73 214 aa13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 IL36BQ9NZH7 164 aa13.37□□□□□ -0.27
UBE2D3-220ENST00000505307 PEX7O00628 323 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 IGHV3-30P01768 117 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 IGHV3-33P01772 117 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 IGHV3-30-3P0DP02 117 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 IGHV3-30-5P0DP03 117 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 AKR1C8PQ5T2L2 129 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 TMEM70Q9BUB7 260 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 Q9HAA7 133 aa13.36□□□□□ -0.27
UBE2D3-220ENST00000505307 INAFM2P0DMQ5 153 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 DNLZQ5SXM8 178 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 Q5VSD8 79 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 COX8CQ7Z4L0 72 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 Q86TA4 180 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 OR2T35Q8NGX2 323 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 ZFP30Q9Y2G7 519 aa13.35□□□□□ -0.27
UBE2D3-220ENST00000505307 A0A087WWC5 75 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 FAM74A7A6NL05 159 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 B4DEV8 164 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 RHODO00212 210 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 UBE2G2P60604 165 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 Q8N814 137 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 SYT8Q8NBV8 401 aa13.34□□□□□ -0.27
UBE2D3-220ENST00000505307 LINC00694P0DN24 101 aa13.33□□□□□ -0.28
UBE2D3-220ENST00000505307 TOR2AQ5JU69 321 aa13.33□□□□□ -0.28
UBE2D3-220ENST00000505307 Q6ZSN1 163 aa13.33□□□□□ -0.28
UBE2D3-220ENST00000505307 TCEAL7Q9BRU2 100 aa13.33□□□□□ -0.28
UBE2D3-220ENST00000505307 TRAV8-3A0A0A6YYJ7 113 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 GAGE12JA6NER3 117 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 GAGE1Q13065 139 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 GAGE4Q13068 117 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 GAGE5Q13069 117 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 GAGE13Q4V321 117 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 UFSP1Q6NVU6 142 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 FMC1Q96HJ9 113 aa13.32□□□□□ -0.28
UBE2D3-220ENST00000505307 KRBOX1C9JBD0 128 aa13.31□□□□□ -0.28
UBE2D3-220ENST00000505307 FAM162BQ5T6X4 162 aa13.31□□□□□ -0.28
UBE2D3-220ENST00000505307 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
UBE2D3-220ENST00000505307 FAT1Q14517 4588 aa13.31□□□□□ -0.28
UBE2D3-220ENST00000505307 MAP1LC3B2A6NCE7 125 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 FAM229AH3BQW9 127 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 H3BVH4 76 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 C1QBP02746 253 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 ARMS2P0C7Q2 107 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 FHITP49789 147 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 CRIP1P50238 77 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 UBE2G1P62253 170 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 OR11H4Q8NGC9 324 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 ZC2HC1AQ96GY0 325 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 MAP1LC3BQ9GZQ8 125 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 COX11Q9Y6N1 276 aa13.3□□□□□ -0.28
UBE2D3-220ENST00000505307 HERC1Q15751 4861 aa13.29□□□□□ -0.28
UBE2D3-220ENST00000505307 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
UBE2D3-220ENST00000505307 SEC11BP0C7V7 166 aa13.29□□□□□ -0.28
UBE2D3-220ENST00000505307 SAMD10Q9BYL1 202 aa13.29□□□□□ -0.28
UBE2D3-220ENST00000505307 JPT2Q9H910 190 aa13.29□□□□□ -0.28
UBE2D3-220ENST00000505307 SH2D1AO60880 128 aa13.28□□□□□ -0.28
UBE2D3-220ENST00000505307 PHLDA3Q9Y5J5 127 aa13.28□□□□□ -0.28
UBE2D3-220ENST00000505307 M0R036 132 aa13.27□□□□□ -0.29
UBE2D3-220ENST00000505307 SMR3BP02814 79 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-220ENST00000505307 TPT1P13693 172 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-220ENST00000505307 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms