RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 POM121L12Q8N7R1 296 aa6.97□□□□□ -1.29
NR1I3-220ENST00000505005 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 TRGV4A0A0C4DH28 118 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 IGHV3-16A0A0C4DH30 117 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 A8MWV9 139 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 BTF3P20290 206 aaKnown RBP6.96□□□□□ -1.3
NR1I3-220ENST00000505005 RPS20P60866 119 aaKnown RBP6.96□□□□□ -1.3
NR1I3-220ENST00000505005 MRPL23Q16540 153 aaKnown RBP6.96□□□□□ -1.3
NR1I3-220ENST00000505005 ZNF674Q2M3X9 581 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 PRR9Q5T870 116 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 OR4C5Q8NGB2 326 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 PARLQ9H300 379 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 IL36BQ9NZH7 164 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NR1I3-220ENST00000505005 A0A087WWC5 75 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 TRAV34A0A0B4J273 112 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 K7EP13 123 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 TYMSP04818 313 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 GNG4P50150 75 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 Q6ZTI0 123 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 SGK494Q96LW2 274 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 HHLA3Q9XRX5 114 aa6.95□□□□□ -1.3
NR1I3-220ENST00000505005 TENM2Q9NT68 2774 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 RHODO00212 210 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 PAX4O43316 350 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 NUDT3O95989 172 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 RPL35P42766 123 aaKnown RBP6.94□□□□□ -1.3
NR1I3-220ENST00000505005 ZFP2Q6ZN57 461 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.94□□□□□ -1.3
NR1I3-220ENST00000505005 LINC00479Q96M42 142 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 C8orf49Q96NF6 230 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 PRADC1Q9BSG0 188 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 TMEM242Q9NWH2 141 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 MDFICQ9P1T7 246 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 PHLDA3Q9Y5J5 127 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 ICOSQ9Y6W8 199 aa6.94□□□□□ -1.3
NR1I3-220ENST00000505005 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 TRAV26-1A0A087WT03 109 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 GNRH2O43555 120 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 PRM2P04554 102 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 PRB4P10163 310 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-220ENST00000505005 MGST1P10620 155 aaKnown RBP6.93□□□□□ -1.3
NR1I3-220ENST00000505005 ZFP82Q8N141 532 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
NR1I3-220ENST00000505005 TRBV6-4A0A1B0GX49 114 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 F2Z2F3 143 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 SH2D1AO60880 128 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 ZNF80P51504 273 aaPredicted RBP6.92□□□□□ -1.3
NR1I3-220ENST00000505005 TTC32Q5I0X7 151 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 ZC2HC1AQ96GY0 325 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 C9orf85Q96MD7 179 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 MRPL16Q9NX20 251 aaKnown RBP6.92□□□□□ -1.3
NR1I3-220ENST00000505005 MUC4Q99102 2169 aa6.92□□□□□ -1.3
NR1I3-220ENST00000505005 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 A0A1W2PPQ1 181 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 EIF4EBP3O60516 100 aaPredicted RBP6.91□□□□□ -1.3
NR1I3-220ENST00000505005 MT-ND4LP03901 98 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 SRIP30626 198 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 CEBPGP53567 150 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 CRYBA4P53673 196 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 RHOHQ15669 191 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
NR1I3-220ENST00000505005 TRBV20OR9-2A0A075B6H5 130 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 IGKV3D-20A0A0C4DH25 116 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 C7orf77A4D0Y5 90 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 M0R036 132 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 RS1O15537 224 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 P01737 135 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 OR5AL1P0C617 328 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 ARMS2P0C7Q2 107 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.3
NR1I3-220ENST00000505005 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
NR1I3-220ENST00000505005 FHL2Q14192 279 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 UPK3BQ9BT76 320 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 SMCO4Q9NRQ5 59 aa6.9□□□□□ -1.3
NR1I3-220ENST00000505005 HOXA5P20719 270 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 TIRAPP58753 221 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 CACNG7P62955 275 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
NR1I3-220ENST00000505005 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms