RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 NIPBLQ6KC79 2804 aaeCLIP6.77□□□□□ -1.33
LINC02239-201ENST00000504339 SORL1Q92673 2214 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 CBY3A6NI87 242 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 H3BVH4 76 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 COX8AP10176 69 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 HOXD3P31249 432 aaPredicted RBP6.77□□□□□ -1.33
LINC02239-201ENST00000504339 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 C2orf91Q6ZV80 131 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 WFDC12Q8WWY7 111 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 MTORP42345 2549 aa6.77□□□□□ -1.33
LINC02239-201ENST00000504339 KLLNB2CW77 178 aa6.76□□□□□ -1.33
LINC02239-201ENST00000504339 GNRH2O43555 120 aa6.76□□□□□ -1.33
LINC02239-201ENST00000504339 RNASE4P34096 147 aaKnown RBP6.76□□□□□ -1.33
LINC02239-201ENST00000504339 GCN1Q92616 2671 aaKnown RBP6.76□□□□□ -1.33
LINC02239-201ENST00000504339 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
LINC02239-201ENST00000504339 LGALS9O00182 355 aa6.76□□□□□ -1.33
LINC02239-201ENST00000504339 CD5LO43866 347 aa6.76□□□□□ -1.33
LINC02239-201ENST00000504339 SETD2Q9BYW2 2564 aaPredicted RBP6.76□□□□□ -1.33
LINC02239-201ENST00000504339 IGLV2-18A0A075B6J9 118 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 TRAV21A0A0B4J279 112 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 K7EQG2 157 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 ZNF688P0C7X2 276 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
LINC02239-201ENST00000504339 NRACQ8N912 160 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 ESM1Q9NQ30 184 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 TRBV7-9A0A0J9YWB2 115 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 TNFRSF6BO95407 300 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 FGF6P10767 208 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 CDKN1BP46527 198 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 SLURP1P55000 103 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 AMMECR1LQ6DCA0 310 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
LINC02239-201ENST00000504339 FASNP49327 2511 aaKnown RBP6.75□□□□□ -1.33
LINC02239-201ENST00000504339 J3QKU1 62 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 PPBPP02775 128 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 PSMG4Q5JS54 123 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 HECTD1Q9ULT8 2610 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 A0A0J9YX75 114 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 LGALS9BQ3B8N2 356 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 LGALS9CQ6DKI2 356 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 Q6ZSV7 163 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 DPF1Q92782 380 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 AGRNO00468 2067 aa6.74□□□□□ -1.33
LINC02239-201ENST00000504339 MUC4Q99102 2169 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 TRAV8-6A0A0B4J262 113 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 ID1P41134 155 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 CACNG7P62955 275 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 TMEM97Q5BJF2 176 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 SPANXN1Q5VSR9 72 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 DNAJC9-AS1A6NH13 148 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 M0R381 172 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 HBDP02042 147 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 OR2K2Q8NGT1 345 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
LINC02239-201ENST00000504339 C7orf71A4D174 169 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 PRSS47A8MTI9 375 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 IGKV3-20P01619 116 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 LINC00315P59091 139 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 SEC11AP67812 179 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 RNF151Q2KHN1 245 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 AMTNQ6UX39 209 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 OR1N2Q8NGR9 330 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 MAP1LC3AQ9H492 121 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
LINC02239-201ENST00000504339 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 TRAV12-3A0A0B4J271 114 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 NXPH4O95158 308 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 ASIPP42127 132 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 TCTAP57738 103 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 SAMD13Q5VXD3 122 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 TMEM86BQ8N661 226 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 OR11H1Q8NG94 326 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 KIF25-AS1Q9Y6Z4 181 aa6.71□□□□□ -1.33
LINC02239-201ENST00000504339 MED14OSP0DP75 135 aa6.71□□□□□ -1.34
LINC02239-201ENST00000504339 C14orf178Q8N769 122 aaPredicted RBP6.71□□□□□ -1.34
LINC02239-201ENST00000504339 C4orf3Q8WVX3 66 aa6.71□□□□□ -1.34
LINC02239-201ENST00000504339 RASL10AQ92737 203 aa6.71□□□□□ -1.34
LINC02239-201ENST00000504339 DLX4Q92988 240 aaPredicted RBP6.71□□□□□ -1.34
LINC02239-201ENST00000504339 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
LINC02239-201ENST00000504339 S100A4P26447 101 aaKnown RBP6.7□□□□□ -1.34
LINC02239-201ENST00000504339 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
LINC02239-201ENST00000504339 OCIAD2Q56VL3 154 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 Q8N8P6 123 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 ODF3Q96PU9 254 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 JPT2Q9H910 190 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 NOTCH2Q04721 2471 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 OTOGQ6ZRI0 2925 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 LINC01619G3V211 115 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 RBMY1A1P0DJD3 496 aaKnown RBP6.7□□□□□ -1.34
LINC02239-201ENST00000504339 RBMY1CP0DJD4 496 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 LEPP41159 167 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 RBMY1FQ15415 496 aaKnown RBP6.7□□□□□ -1.34
LINC02239-201ENST00000504339 OR9G4Q8NGQ1 327 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 NXT2Q9NPJ8 142 aaKnown RBP6.7□□□□□ -1.34
LINC02239-201ENST00000504339 MDFICQ9P1T7 246 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms