RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 F8P00451 2351 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 PDZD2O15018 2839 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 MUC21A0A0G2JKD1 596 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 MUC21A0A140T8X8 626 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 A0A1B0GV90 55 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 M0R143 59 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 NDUFA7O95182 113 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 SRD5A1P18405 259 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 G0S2P27469 103 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
COL1A1-210ENST00000504289 LGALS9BQ3B8N2 356 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 PIK3CD-AS1Q5SR53 167 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 MUC21Q5SSG8 566 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 LGALS9CQ6DKI2 356 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 ADAMTSL5Q6ZMM2 481 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 WFDC3Q8IUB2 231 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 NRACQ8N912 160 aa7.31□□□□□ -1.24
COL1A1-210ENST00000504289 SPAG8Q99932 426 aaPredicted RBP7.31□□□□□ -1.24
COL1A1-210ENST00000504289 CSMD1Q96PZ7 3565 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 IGLV2-18A0A075B6J9 118 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 TRGV11A0A075B6L2 103 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 A0A096LNJ9 63 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 LOC389332A0A1B0GUA5 103 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 RNASE3P12724 160 aaKnown RBP7.3□□□□□ -1.24
COL1A1-210ENST00000504289 HLA-DRB4P13762 266 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 EDN2P20800 178 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 SLURP1P55000 103 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 HILS1P60008 231 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 KIR3DS1Q14943 382 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 AMTNQ6UX39 209 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 SYT8Q8NBV8 401 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 KLHL30-AS1Q8NEE0 82 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 PTH2Q96A98 100 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 LINC00467Q9BRT7 94 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 MRPS16Q9Y3D3 137 aaKnown RBP7.3□□□□□ -1.24
COL1A1-210ENST00000504289 TSSC4Q9Y5U2 329 aaPredicted RBP7.3□□□□□ -1.24
COL1A1-210ENST00000504289 HLA-DRB4X5D2U9 266 aa7.3□□□□□ -1.24
COL1A1-210ENST00000504289 IGHV1OR15-1A0A075B7D0 117 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 SMKR1H3BMG3 65 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 TCAPO15273 167 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 ATP5LO75964 103 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 NCR2O95944 276 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 DEFB114Q30KQ6 69 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 DYNLRB2Q8TF09 96 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
COL1A1-210ENST00000504289 IFI27L1Q96BM0 104 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 C9orf85Q96MD7 179 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 DUX5Q96PT3 197 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 PMCHL2Q9BQD1 86 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 ESM1Q9NQ30 184 aa7.29□□□□□ -1.24
COL1A1-210ENST00000504289 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 GNRH2O43555 120 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 CD7P09564 240 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 SMIM17P0DL12 118 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 TFPI2P48307 235 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 DEFB1P60022 68 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 NUTF2P61970 127 aaKnown RBP7.28□□□□□ -1.24
COL1A1-210ENST00000504289 LAGE3Q14657 143 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 PRR31Q5SQ13 230 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 LINC00173Q6ZV60 143 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 KIF25-AS1Q9Y6Z4 181 aa7.28□□□□□ -1.24
COL1A1-210ENST00000504289 SONP18583 2426 aaKnown RBP7.28□□□□□ -1.24
COL1A1-210ENST00000504289 TRAV12-3A0A0B4J271 114 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 H3BMM0 161 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 J3KRW8 73 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 CCL24O00175 119 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 IGLL1P15814 213 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 SUMO2P61956 95 aaKnown RBP7.27□□□□□ -1.25
COL1A1-210ENST00000504289 KHDC1LQ5JSQ8 128 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 Q6ZQT7 251 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 TMEM61Q8N0U2 210 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 LINC01006Q8NI28 216 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 RAX2Q96IS3 184 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 FAM110AQ9BQ89 295 aa7.27□□□□□ -1.25
COL1A1-210ENST00000504289 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 HNRNPA3P51991 378 aaKnown RBP7.26□□□□□ -1.25
COL1A1-210ENST00000504289 LINC00315P59091 139 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 DEFB131AP59861 70 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 GAGE1Q13065 139 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 DEFB136Q30KP8 78 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 Q6ZN92 141 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 C18orf65Q6ZTR6 163 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
COL1A1-210ENST00000504289 RASL10AQ92737 203 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 EDA2RQ9HAV5 297 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 GOLT1BQ9Y3E0 138 aa7.26□□□□□ -1.25
COL1A1-210ENST00000504289 SETD2Q9BYW2 2564 aaPredicted RBP7.26□□□□□ -1.25
COL1A1-210ENST00000504289 CSMD2Q7Z408 3487 aa7.25□□□□□ -1.25
COL1A1-210ENST00000504289 SLC25A34Q6PIV7 304 aa7.25□□□□□ -1.25
COL1A1-210ENST00000504289 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
COL1A1-210ENST00000504289 MAP6D1Q9H9H5 199 aa7.25□□□□□ -1.25
COL1A1-210ENST00000504289 ZNF256Q9Y2P7 627 aaPredicted RBP7.25□□□□□ -1.25
COL1A1-210ENST00000504289 TIMM8BQ9Y5J9 83 aaPredicted RBP7.25□□□□□ -1.25
COL1A1-210ENST00000504289 VCYO14598 125 aa7.24□□□□□ -1.25
COL1A1-210ENST00000504289 DLEU1O43261 78 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms