RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 HIST1H4AP62805 103 aaKnown RBP2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 PRCDQ00LT1 54 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 ERCC8Q13216 396 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 BRD3OSQ6XYD6 125 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 FP248Q71RG6 208 aaPredicted RBP2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 LINC01561Q8N1V8 128 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 SPRR3Q9UBC9 169 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 TP53TG1Q9Y2A0 90 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 OTOGQ6ZRI0 2925 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV8-3A0A0A6YYJ7 113 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV1-18A0A0C4DH31 117 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 FAM236AA0A1B0GUQ0 79 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 FAM236BA0A1B0GV22 79 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 SRRM4A7MD48 611 aaKnown RBP2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 H3BMG7 143 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 FCN3O75636 299 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 WISP2O76076 250 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 CNTFRP26992 372 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 SEC11AP67812 179 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 TMEM200BQ69YZ2 307 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 MORN3Q6PF18 240 aaPredicted RBP2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 DUX4L9Q6RFH8 374 aaPredicted RBP2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 OTORQ9NRC9 128 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 A0A096LNJ9 63 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV1-46P01743 117 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 CD28P10747 220 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 C15orf32Q32M92 178 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 PSMG4Q5JS54 123 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 GGNQ86UU5 652 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 GATD1Q8NB37 220 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 OR4X2Q8NGF9 303 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 PRADC1Q9BSG0 188 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 AKAP13Q12802 2813 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV13-1A0A0B4J241 112 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 LINC00158P58513 81 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 PAPPA-AS1Q5QFB9 102 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 LYPD2Q6UXB3 125 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 TMEM75Q8N9X5 138 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 WIPF2Q8TF74 440 aaPredicted RBP2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 C1orf159Q96HA4 380 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 UBE2E2Q96LR5 201 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 PYGO1Q9Y3Y4 419 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 SLC25A15Q9Y619 301 aa2.88□□□□□ -1.95
PCDH11X-208ENST00000504220 IGLV3-12A0A075B6K2 115 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 SRRM5B3KS81 715 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 K7ERJ3 54 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 OVOL1O14753 267 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 FXYD2P54710 66 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 MORN5Q5VZ52 161 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 Q6ZPA2 131 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 RNF182Q8N6D2 247 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 DLX4Q92988 240 aaPredicted RBP2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 JPT2Q9H910 190 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 NXT2Q9NPJ8 142 aaKnown RBP2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 TET2Q6N021 2002 aaPredicted RBP2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 FLNBO75369 2602 aaKnown RBP2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 SVEP1Q4LDE5 3571 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV26-2A0A0B4J265 109 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 ZZEF1O43149 2961 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 PAX4O43316 350 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 NDUFA7O95182 113 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 IFI6P09912 130 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 PLNP26678 52 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 DTX2Q86UW9 622 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 RPRMLQ8N4K4 120 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 MAPK1IP1LQ8NDC0 245 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 FAM168AQ92567 244 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 RNASE6Q93091 150 aaKnown RBP2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 CHCHD5Q9BSY4 110 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 BSNQ9UPA5 3926 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 ARHGAP32A7KAX9 2087 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 IGKV1D-17A0A075B6S4 117 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV9-1A0A075B6T8 112 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV8-4A0A0B4J246 113 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 ADARB2-AS1A8MUL3 147 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 J3QKU1 62 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 SH2D1AO60880 128 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 IGKV1-39P01597 117 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 IGKV1D-39P04432 117 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 HERVK_113P63121 156 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 C3orf22Q8N5N4 141 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 C11orf45Q8TAV5 145 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 C1orf147Q96MC9 270 aaPredicted RBP2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 TTTY13Q9BZ97 58 aa2.87□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV3-16A0A0C4DH30 117 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 LINC01549A6NIU2 74 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 EFNA4P52798 201 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 KLF5Q13887 457 aaPredicted RBP2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 Q6P435 159 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 C2orf82Q6UX34 121 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 SLC25A48Q6ZT89 311 aaKnown RBP2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 CSMD3Q7Z407 3707 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 DMXL2Q8TDJ6 3036 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 GGTLC3B5MD39 225 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 PF4P02776 101 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 CLPSP04118 112 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 RNASE2P10153 161 aaKnown RBP2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 LAGE3Q14657 143 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 KRTAP27-1Q3LI81 207 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms