RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 IGHV3-30P01768 117 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 IGHV3-33P01772 117 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
SNCA-207ENST00000502987 IGHV3-30-3P0DP02 117 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 IGHV3-30-5P0DP03 117 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 SUMO1P63165 101 aaKnown RBP7.23□□□□□ -1.25
SNCA-207ENST00000502987 SMUG1Q53HV7 270 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 Q5VSD8 79 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 CFAP126Q5VTH2 177 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 C5orf17Q8NAS9 161 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
SNCA-207ENST00000502987 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 RS1O15537 224 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 CIDEAO60543 219 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 MBP02144 154 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 TCRAP04437 139 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 S100A4P26447 101 aaKnown RBP7.22□□□□□ -1.25
SNCA-207ENST00000502987 GCHFRP30047 84 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 ZNF80P51504 273 aaPredicted RBP7.22□□□□□ -1.25
SNCA-207ENST00000502987 FLI1Q01543 452 aaPredicted RBP7.22□□□□□ -1.25
SNCA-207ENST00000502987 RHOHQ15669 191 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 ACTR3CQ9C0K3 210 aaPredicted RBP7.22□□□□□ -1.25
SNCA-207ENST00000502987 ALG5Q9Y673 324 aa7.22□□□□□ -1.25
SNCA-207ENST00000502987 SRRM2Q9UQ35 2752 aaKnown RBP7.22□□□□□ -1.25
SNCA-207ENST00000502987 TRBV6-4A0A1B0GX49 114 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 PGPEP1LA6NFU8 196 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 IBA57-AS1B1ANH7 110 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 CXorf1O96002 111 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 STAG3L2P0CL84 134 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 STAG3L3P0CL85 134 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 ATP6V0CP27449 155 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 TIRAPP58753 221 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 LINC01556Q5JQF7 62 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 DPPA3Q6W0C5 159 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 TMEM75Q8N9X5 138 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 ATP6V0E2Q8NHE4 81 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 MED28Q9H204 178 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 TMEM167BQ9NRX6 74 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 C11orf21Q9P2W6 132 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 EPDR1Q9UM22 224 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 FAT1Q14517 4588 aa7.21□□□□□ -1.26
SNCA-207ENST00000502987 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 IFNA7P01567 189 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 MGST1P10620 155 aaKnown RBP7.2□□□□□ -1.26
SNCA-207ENST00000502987 HAMPP81172 84 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 SERF2P84101 59 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 LGALSLQ3ZCW2 172 aaPredicted RBP7.2□□□□□ -1.26
SNCA-207ENST00000502987 ZNF506Q5JVG8 444 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 SAPCD1Q5SSQ6 148 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 LELP1Q5T871 98 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 CYB561D1Q8N8Q1 229 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 OR2G3Q8NGZ4 309 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
SNCA-207ENST00000502987 GTSF1LQ9H1H1 148 aa7.2□□□□□ -1.26
SNCA-207ENST00000502987 TRAV34A0A0B4J273 112 aa7.19□□□□□ -1.26
SNCA-207ENST00000502987 INO80EQ8NBZ0 244 aaPredicted RBP7.19□□□□□ -1.26
SNCA-207ENST00000502987 C9orf85Q96MD7 179 aa7.19□□□□□ -1.26
SNCA-207ENST00000502987 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
SNCA-207ENST00000502987 SH3BGRL3Q9H299 93 aa7.19□□□□□ -1.26
SNCA-207ENST00000502987 LRCOL1A6NCL2 159 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 FABP5P3A8MUU1 101 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 GGTLC3B5MD39 225 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 UBE2G2P60604 165 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 GAGE1Q13065 139 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 GAGE4Q13068 117 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 GAGE5Q13069 117 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 GAGE13Q4V321 117 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 Q8N814 137 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 OR2T35Q8NGX2 323 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 NTN5Q8WTR8 489 aaPredicted RBP7.18□□□□□ -1.26
SNCA-207ENST00000502987 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 AQP10Q96PS8 301 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 TNFSF18Q9UNG2 199 aa7.18□□□□□ -1.26
SNCA-207ENST00000502987 BORCS7-ASMTA0A0B4J1R7 106 aa7.17□□□□□ -1.26
SNCA-207ENST00000502987 A8MWV9 139 aa7.17□□□□□ -1.26
SNCA-207ENST00000502987 IGLV2-11P01706 119 aa7.17□□□□□ -1.26
SNCA-207ENST00000502987 RNASE3P12724 160 aaKnown RBP7.17□□□□□ -1.26
SNCA-207ENST00000502987 ASIPP42127 132 aa7.17□□□□□ -1.26
SNCA-207ENST00000502987 SUN5Q8TC36 379 aa7.17□□□□□ -1.26
SNCA-207ENST00000502987 PTH2Q96A98 100 aa7.17□□□□□ -1.26
SNCA-207ENST00000502987 HERC1Q15751 4861 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 FXYD6-FXYD2A0A087WZ82 144 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 A0A1W2PRE2 83 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 B4DEV8 164 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 RPL7L1Q6DKI1 246 aaKnown RBP7.16□□□□□ -1.26
SNCA-207ENST00000502987 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 Q6ZSN1 163 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 SYT8Q8NBV8 401 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 PARLQ9H300 379 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 URGCP-MRPS24S4R325 110 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 ARL2-SNX15V9GYD0 113 aa7.16□□□□□ -1.26
SNCA-207ENST00000502987 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.26
SNCA-207ENST00000502987 TRAV8-3A0A0A6YYJ7 113 aa7.15□□□□□ -1.26
SNCA-207ENST00000502987 IGKV3D-20A0A0C4DH25 116 aa7.15□□□□□ -1.26
SNCA-207ENST00000502987 H3BVH4 76 aa7.15□□□□□ -1.26
SNCA-207ENST00000502987 M0R036 132 aa7.15□□□□□ -1.26
SNCA-207ENST00000502987 PEX7O00628 323 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms