RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 LINC00479Q96M42 142 aa13.32□□□□□ -0.28
SFXN1-203ENST00000502393 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
SFXN1-203ENST00000502393 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
SFXN1-203ENST00000502393 IGHV3-73A0A0B4J1V6 119 aa13.3□□□□□ -0.28
SFXN1-203ENST00000502393 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
SFXN1-203ENST00000502393 TRAV34A0A0B4J273 112 aa13.3□□□□□ -0.28
SFXN1-203ENST00000502393 IFNA7P01567 189 aa13.3□□□□□ -0.28
SFXN1-203ENST00000502393 LINC01556Q5JQF7 62 aa13.3□□□□□ -0.28
SFXN1-203ENST00000502393 ARL2-SNX15V9GYD0 113 aa13.3□□□□□ -0.28
SFXN1-203ENST00000502393 IGKV3D-20A0A0C4DH25 116 aa13.29□□□□□ -0.28
SFXN1-203ENST00000502393 FABP5P3A8MUU1 101 aa13.29□□□□□ -0.28
SFXN1-203ENST00000502393 FUSP35637 526 aaKnown RBP eCLIP13.29□□□□□ -0.28
SFXN1-203ENST00000502393 PIK3CD-AS1Q5SR53 167 aa13.29□□□□□ -0.28
SFXN1-203ENST00000502393 AKR1C8PQ5T2L2 129 aa13.29□□□□□ -0.28
SFXN1-203ENST00000502393 HIST1H2BAQ96A08 127 aa13.29□□□□□ -0.28
SFXN1-203ENST00000502393 FAM74A7A6NL05 159 aa13.28□□□□□ -0.28
SFXN1-203ENST00000502393 PEX7O00628 323 aa13.28□□□□□ -0.28
SFXN1-203ENST00000502393 S100A4P26447 101 aaKnown RBP13.28□□□□□ -0.28
SFXN1-203ENST00000502393 UBE2G2P60604 165 aa13.28□□□□□ -0.28
SFXN1-203ENST00000502393 OR10J3Q5JRS4 329 aa13.28□□□□□ -0.28
SFXN1-203ENST00000502393 A8MWV9 139 aa13.27□□□□□ -0.29
SFXN1-203ENST00000502393 IBA57-AS1B1ANH7 110 aa13.27□□□□□ -0.29
SFXN1-203ENST00000502393 LELP1Q5T871 98 aa13.27□□□□□ -0.29
SFXN1-203ENST00000502393 ZFP2Q6ZN57 461 aa13.27□□□□□ -0.29
SFXN1-203ENST00000502393 G3V3Q6 166 aa13.26□□□□□ -0.29
SFXN1-203ENST00000502393 ASIPP42127 132 aa13.26□□□□□ -0.29
SFXN1-203ENST00000502393 FGF8P55075 233 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-203ENST00000502393 Q86TA4 180 aa13.26□□□□□ -0.29
SFXN1-203ENST00000502393 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
SFXN1-203ENST00000502393 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
SFXN1-203ENST00000502393 PSCAO43653 123 aa13.25□□□□□ -0.29
SFXN1-203ENST00000502393 PARLQ9H300 379 aa13.25□□□□□ -0.29
SFXN1-203ENST00000502393 IL36BQ9NZH7 164 aa13.25□□□□□ -0.29
SFXN1-203ENST00000502393 ZFP30Q9Y2G7 519 aa13.25□□□□□ -0.29
SFXN1-203ENST00000502393 B4DEV8 164 aa13.24□□□□□ -0.29
SFXN1-203ENST00000502393 ARPC5O15511 151 aa13.24□□□□□ -0.29
SFXN1-203ENST00000502393 RGS21Q2M5E4 152 aa13.24□□□□□ -0.29
SFXN1-203ENST00000502393 LGALSLQ3ZCW2 172 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-203ENST00000502393 COX8CQ7Z4L0 72 aa13.24□□□□□ -0.29
SFXN1-203ENST00000502393 CYTL1Q9NRR1 136 aa13.24□□□□□ -0.29
SFXN1-203ENST00000502393 MAP1LC3B2A6NCE7 125 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 CRIP1P50238 77 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 XGP55808 180 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 KRTAP10-1P60331 282 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 DNLZQ5SXM8 178 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 Q6ZSN1 163 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 FMC1Q96HJ9 113 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 TCEAL7Q9BRU2 100 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 MAP1LC3BQ9GZQ8 125 aa13.23□□□□□ -0.29
SFXN1-203ENST00000502393 LRCOL1A6NCL2 159 aa13.22□□□□□ -0.29
SFXN1-203ENST00000502393 EPM2AB3EWF7 344 aa13.22□□□□□ -0.29
SFXN1-203ENST00000502393 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
SFXN1-203ENST00000502393 GCSHP23434 173 aa13.22□□□□□ -0.29
SFXN1-203ENST00000502393 UFSP1Q6NVU6 142 aa13.22□□□□□ -0.29
SFXN1-203ENST00000502393 ZC2HC1AQ96GY0 325 aa13.22□□□□□ -0.29
SFXN1-203ENST00000502393 IGHV3-30P01768 117 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 IGHV3-33P01772 117 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 IGHV3-30-3P0DP02 117 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 IGHV3-30-5P0DP03 117 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 FHITP49789 147 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 FAM162BQ5T6X4 162 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 STOML3Q8TAV4 291 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 Q9HAA7 133 aa13.21□□□□□ -0.29
SFXN1-203ENST00000502393 H3BVH4 76 aa13.2□□□□□ -0.3
SFXN1-203ENST00000502393 SH2D1AO60880 128 aa13.2□□□□□ -0.3
SFXN1-203ENST00000502393 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
SFXN1-203ENST00000502393 UBE2G1P62253 170 aa13.2□□□□□ -0.3
SFXN1-203ENST00000502393 LAGE3Q14657 143 aa13.2□□□□□ -0.3
SFXN1-203ENST00000502393 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
SFXN1-203ENST00000502393 JPT2Q9H910 190 aa13.2□□□□□ -0.3
SFXN1-203ENST00000502393 TRBV6-1A0A0K0K1D8 114 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 GAGE12JA6NER3 117 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 M0R036 132 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 RHODO00212 210 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 GAGE1Q13065 139 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 GAGE4Q13068 117 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 GAGE5Q13069 117 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 ZNF674Q2M3X9 581 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 GAGE13Q4V321 117 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 SAMD10Q9BYL1 202 aa13.19□□□□□ -0.3
SFXN1-203ENST00000502393 LTAP01374 205 aa13.18□□□□□ -0.3
SFXN1-203ENST00000502393 CST9LP1Q5W188 147 aa13.18□□□□□ -0.3
SFXN1-203ENST00000502393 OR11H4Q8NGC9 324 aa13.18□□□□□ -0.3
SFXN1-203ENST00000502393 A0A087WWC5 75 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 IGLV5-52A0A0A0MRZ9 124 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 ZNF345Q14585 488 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 C14orf178Q8N769 122 aaPredicted RBP13.17□□□□□ -0.3
SFXN1-203ENST00000502393 Q8N814 137 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 TM2D2Q9BX73 214 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 PHLDA3Q9Y5J5 127 aa13.17□□□□□ -0.3
SFXN1-203ENST00000502393 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
SFXN1-203ENST00000502393 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
SFXN1-203ENST00000502393 Q9UF83 564 aa13.16□□□□□ -0.3
SFXN1-203ENST00000502393 SMLR1H3BR10 107 aa13.15□□□□□ -0.3
SFXN1-203ENST00000502393 SEC11BP0C7V7 166 aa13.15□□□□□ -0.3
SFXN1-203ENST00000502393 TPT1P13693 172 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms