RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PCBD1P61457 104 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 C3orf33Q6P1S2 294 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 HRCT1Q6UXD1 115 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 STX12Q86Y82 276 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 BRK1Q8WUW1 75 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 CBLN4Q9NTU7 201 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 TMEM242Q9NWH2 141 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 SYNMO15061 1565 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 KIDINS220Q9ULH0 1771 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 EIF3AQ14152 1382 aaKnown RBP-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 LOC107984640A0A0U1RRK4 108 aa-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 PGRMC1O00264 195 aaKnown RBP-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 PPDPFLQ8WWR9 84 aa-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 HOPXQ9BPY8 73 aaPredicted RBP-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 HELZP42694 1942 aaKnown RBP-0.64□□□□□ -2.51
SMAD1-203ENST00000502342 A2MP01023 1474 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 FAM107AO95990 144 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 SPRR2DP22532 72 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 CYP2G1PQ6ZSU1 146 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 MED31Q9Y3C7 131 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 PKDREJQ9NTG1 2253 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 WDR97A6NE52 1622 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 FER1L6Q2WGJ9 1857 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 DCHS2Q6V1P9 2916 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 PKD1L1Q8TDX9 2849 aa-0.65□□□□□ -2.51
SMAD1-203ENST00000502342 SSC5DA1L4H1 1573 aa-0.66□□□□□ -2.51
SMAD1-203ENST00000502342 AKR1D1P51857 326 aa-0.66□□□□□ -2.52
SMAD1-203ENST00000502342 DEFB109BQ30KR1 87 aa-0.66□□□□□ -2.52
SMAD1-203ENST00000502342 GID8Q9NWU2 228 aa-0.66□□□□□ -2.52
SMAD1-203ENST00000502342 TRAPPC2LQ9UL33 140 aa-0.66□□□□□ -2.52
SMAD1-203ENST00000502342 NHSL1Q5SYE7 1610 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 UQCRQO14949 82 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 ACYP2P14621 99 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 GCHFRP30047 84 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 MRPS15P82914 257 aaKnown RBP-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 TRIQKQ629K1 86 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 TAS2R8Q9NYW2 309 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 CCDC171Q6TFL3 1326 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 CHD6Q8TD26 2715 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 APC2O95996 2303 aa-0.67□□□□□ -2.52
SMAD1-203ENST00000502342 CXorf51AA0A1B0GTR3 108 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 E7EQ34 232 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 E2F6O75461 281 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 RPL22P35268 128 aaKnown RBP-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 MAP1BP46821 2468 aaKnown RBP-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 PLGLB1Q02325 96 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 TMEM78Q5T7P6 136 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 SLC48A1Q6P1K1 146 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 UBE2DNLQ8IWF7 75 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 C4orf33Q8N1A6 199 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 CYP4F30PQ9H0H9 118 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 BOLA2Q9H3K6 86 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 PRO0255Q9UI72 69 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 NDUFAF1Q9Y375 327 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 BIVM-ERCC5R4GMW8 1640 aa-0.68□□□□□ -2.52
SMAD1-203ENST00000502342 A0A087WTM6 91 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 TRBV7-1A0A0A6YYK4 115 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 A0A1B0GW64 132 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 ZNF815PA8K554 130 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 M0R3E3 92 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 SLC25A5P05141 298 aaKnown RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 HIST1H1BP16401 226 aaKnown RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 POLR2HP52434 150 aaKnown RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 PSPHP78330 225 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 SSBP1Q04837 148 aaKnown RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 FAM74A4Q5TZK3 123 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 Q6ZRX8 168 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 THEM6Q8WUY1 208 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 SLC35B3Q9H1N7 401 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 METTL1Q9UBP6 276 aaKnown RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 ALMS1Q8TCU4 4167 aa-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 ZNF142P52746 1687 aaPredicted RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 KMT2CQ8NEZ4 4911 aaKnown RBP-0.69□□□□□ -2.52
SMAD1-203ENST00000502342 ROCK1Q13464 1354 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 KDM5CP41229 1560 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 MYH9P35579 1960 aaKnown RBP-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 A0A1W2PRE2 83 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 TCRAP04437 139 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 CCL3L1P16619 93 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 WFDC2Q14508 124 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 OR8B8Q15620 311 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 OR2T2Q6IF00 324 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 SLC25A26Q70HW3 274 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 SSBP3-AS1Q7Z2R9 100 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 DOCK11Q5JSL3 2073 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 CSMD3Q7Z407 3707 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 TENM2Q9NT68 2774 aa-0.7□□□□□ -2.52
SMAD1-203ENST00000502342 HECTD4Q9Y4D8 3996 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 TNXBP22105 4242 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 PLXNA2O75051 1894 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 C2CD3Q4AC94 2353 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 TRAV2A0A0B4J234 112 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 TMEM14DPA8MWL7 114 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 RPL7P18124 248 aaKnown RBP-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 HSD17B12Q53GQ0 312 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 IFI27L1Q96BM0 104 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 ATPIF1Q9UII2 106 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 V9GYV3 84 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 LAMB1P07942 1786 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms