RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 THAP6Q8TBB0 222 aa4.78□□□□□ -1.64
SH3RF1-202ENST00000502315 SUN5Q8TC36 379 aa4.78□□□□□ -1.64
SH3RF1-202ENST00000502315 RMI2Q96E14 147 aa4.78□□□□□ -1.64
SH3RF1-202ENST00000502315 CHCHD7Q9BUK0 85 aa4.78□□□□□ -1.64
SH3RF1-202ENST00000502315 TREM1Q9NP99 234 aa4.78□□□□□ -1.64
SH3RF1-202ENST00000502315 GNRH2O43555 120 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 MBP02144 154 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 TYMSP04818 313 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 H2AFB1P0C5Y9 115 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 ELOBQ15370 118 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 ZFP69Q49AA0 526 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 OR10J3Q5JRS4 329 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 FFAR4Q5NUL3 377 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 CFAP126Q5VTH2 177 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 TCTE3Q8IZS6 198 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 Q8N976 141 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 C5orf17Q8NAS9 161 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 ATP6V0E2Q8NHE4 81 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 C9orf85Q96MD7 179 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 OR5AC2Q9NZP5 309 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 HSPB11Q9Y547 144 aa4.77□□□□□ -1.65
SH3RF1-202ENST00000502315 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 G3V3Q6 166 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 H0YIZ8 118 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 MPC2O95563 127 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 OXTP01178 125 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 RPL12P30050 165 aaKnown RBP4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 SERF2P84101 59 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 SMUG1Q53HV7 270 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 Q5BKY6 102 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 DNLZQ5SXM8 178 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 Q6ZQT7 251 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 PPP1R1CQ8WVI7 109 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 NKX6-2Q9C056 277 aaPredicted RBP4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 TMEM167BQ9NRX6 74 aa4.76□□□□□ -1.65
SH3RF1-202ENST00000502315 TRAV8-1A0A0A6YYK1 113 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 RHODO00212 210 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 SMR3BP02814 79 aaPredicted RBP4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 GIPP09681 153 aaPredicted RBP4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 STAG3L2P0CL84 134 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 STAG3L3P0CL85 134 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 H2BFSP57053 126 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 GOLT1AQ6ZVE7 132 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 TMEM75Q8N9X5 138 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 OR11H4Q8NGC9 324 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 OR2G3Q8NGZ4 309 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 HYLS1Q96M11 299 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 PSMG3Q9BT73 122 aaPredicted RBP4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 NAGKQ9UJ70 344 aa4.75□□□□□ -1.65
SH3RF1-202ENST00000502315 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 TRBV10-1A0A0K0K1A3 114 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 A0A1W2PRE2 83 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 RNF222A6NCQ9 220 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 FABP5P3A8MUU1 101 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 TCRAP04437 139 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 LINC00694P0DN24 101 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 PKIAP61925 76 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 Q0VG73 95 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 LRRC37A5PQ49AS3 106 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 C14orf177Q52M58 125 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 COX8CQ7Z4L0 72 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 CYB561D1Q8N8Q1 229 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 SYT8Q8NBV8 401 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 OR10G7Q8NGN6 311 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 OR2T35Q8NGX2 323 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 TVP23CQ96ET8 276 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 LINC00479Q96M42 142 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 IL36BQ9NZH7 164 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 EPDR1Q9UM22 224 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 URGCP-MRPS24S4R325 110 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
SH3RF1-202ENST00000502315 CXorf1O96002 111 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 RNASE3P12724 160 aaKnown RBP4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 CDC34P49427 236 aaPredicted RBP4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 FLI1Q01543 452 aaPredicted RBP4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 ZNF506Q5JVG8 444 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 ATRAIDQ6UW56 229 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 C9orf62Q8N4C0 152 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 TCEAL7Q9BRU2 100 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 CHAC1Q9BUX1 264 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 Q9HAA7 133 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 FAM30AQ9NZY2 134 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 TNFSF18Q9UNG2 199 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 PSG8Q9UQ74 426 aa4.73□□□□□ -1.65
SH3RF1-202ENST00000502315 FXYD6-FXYD2A0A087WZ82 144 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 PGPEP1LA6NFU8 196 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 GCGP01275 180 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 S100A4P26447 101 aaKnown RBP4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 FUSP35637 526 aaKnown RBP eCLIP4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 ASIPP42127 132 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 UFSP1Q6NVU6 142 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 KCNIP4Q6PIL6 250 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 DPPA3Q6W0C5 159 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 HIST1H2BAQ96A08 127 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 SSBP4Q9BWG4 385 aaPredicted RBP4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 PARLQ9H300 379 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms