RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 FOXA3P55318 350 aaPredicted RBP13.98□□□□□ -0.17
LINC01550-201ENST00000499006 NACAE9PAV3 2078 aa13.97□□□□□ -0.17
LINC01550-201ENST00000499006 A0A087WWC5 75 aa13.97□□□□□ -0.17
LINC01550-201ENST00000499006 A0A0J9YWU9 116 aa13.97□□□□□ -0.17
LINC01550-201ENST00000499006 SMIM27A0A1W2PRY6 76 aa13.97□□□□□ -0.17
LINC01550-201ENST00000499006 FER1L6-AS1Q8NA97 138 aa13.97□□□□□ -0.17
LINC01550-201ENST00000499006 CTDSP1Q9GZU7 261 aa13.97□□□□□ -0.17
LINC01550-201ENST00000499006 NOP10Q9NPE3 64 aaKnown RBP13.97□□□□□ -0.17
LINC01550-201ENST00000499006 A0A1W2PPQ1 181 aa13.96□□□□□ -0.17
LINC01550-201ENST00000499006 SPINK4O60575 86 aa13.96□□□□□ -0.17
LINC01550-201ENST00000499006 CTRLP40313 264 aa13.96□□□□□ -0.17
LINC01550-201ENST00000499006 TMEM242Q9NWH2 141 aa13.96□□□□□ -0.17
LINC01550-201ENST00000499006 DKK2Q9UBU2 259 aa13.96□□□□□ -0.17
LINC01550-201ENST00000499006 M0R2P5 195 aa13.95□□□□□ -0.18
LINC01550-201ENST00000499006 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
LINC01550-201ENST00000499006 LYZL1Q6UWQ5 148 aa13.95□□□□□ -0.18
LINC01550-201ENST00000499006 PTH2Q96A98 100 aa13.95□□□□□ -0.18
LINC01550-201ENST00000499006 CELA1Q9UNI1 258 aa13.95□□□□□ -0.18
LINC01550-201ENST00000499006 LYRM9A8MSI8 78 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 HIGD1CA8MV81 97 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 F2Z2F3 143 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 FAM222AQ5U5X8 452 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 LINC00612Q8N6U2 182 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 RPS10P5Q9NQ39 176 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 U3KQK5 164 aa13.94□□□□□ -0.18
LINC01550-201ENST00000499006 ATP6V1G1O75348 118 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 ATRAIDQ6UW56 229 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 OR10AG1Q8NH19 301 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 RASL10AQ92737 203 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 CNFNQ9BYD5 112 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 PHLDA3Q9Y5J5 127 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 NXPH4O95158 308 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 Q6ZTI0 123 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 NUP35Q8NFH5 326 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 TPPP3Q9BW30 176 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 NAT8BQ9UHF3 227 aa13.93□□□□□ -0.18
LINC01550-201ENST00000499006 IGHV4-4A0A075B6R2 117 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 SPART-AS1P0CW21 52 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 ZNF876PQ49A33 203 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 PIK3CD-AS1Q5SR53 167 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 WDR73Q6P4I2 378 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 PGLYRP4Q96LB8 373 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 IMMP2LQ96T52 175 aa13.92□□□□□ -0.18
LINC01550-201ENST00000499006 MRPL16Q9NX20 251 aaKnown RBP13.92□□□□□ -0.18
LINC01550-201ENST00000499006 TRGV1A0A0A0MS02 117 aa13.91□□□□□ -0.18
LINC01550-201ENST00000499006 MUC21A0A0G2JKD1 596 aa13.91□□□□□ -0.18
LINC01550-201ENST00000499006 MUC21A0A140T8X8 626 aa13.91□□□□□ -0.18
LINC01550-201ENST00000499006 ZFP82Q8N141 532 aa13.91□□□□□ -0.18
LINC01550-201ENST00000499006 NDUFAF3Q9BU61 184 aa13.91□□□□□ -0.18
LINC01550-201ENST00000499006 TEX48A0A1B0GUV7 120 aa13.9□□□□□ -0.18
LINC01550-201ENST00000499006 CACNG7P62955 275 aa13.9□□□□□ -0.18
LINC01550-201ENST00000499006 EDA2RQ9HAV5 297 aa13.9□□□□□ -0.18
LINC01550-201ENST00000499006 STAB2Q8WWQ8 2551 aa13.89□□□□□ -0.19
LINC01550-201ENST00000499006 M0R381 172 aa13.89□□□□□ -0.19
LINC01550-201ENST00000499006 SPANXN1Q5VSR9 72 aa13.89□□□□□ -0.19
LINC01550-201ENST00000499006 C18orf15Q96N68 181 aa13.89□□□□□ -0.19
LINC01550-201ENST00000499006 GAGE12BA1L429 117 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 GAGE7O76087 117 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 GAGE12FP0CL80 117 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 GAGE12GP0CL81 117 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 GAGE12IP0CL82 117 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 NTF3P20783 257 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 S100A1P23297 94 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 FAM3BP58499 235 aaPredicted RBP13.88□□□□□ -0.19
LINC01550-201ENST00000499006 SYT8Q8NBV8 401 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 TGP01266 2768 aa13.88□□□□□ -0.19
LINC01550-201ENST00000499006 A0A1B0GUT8 65 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 C12orf74Q32Q52 190 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 SSTP61278 116 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 POM121L12Q8N7R1 296 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 C11orf45Q8TAV5 145 aa13.87□□□□□ -0.19
LINC01550-201ENST00000499006 DAD1P61803 113 aa13.86□□□□□ -0.19
LINC01550-201ENST00000499006 JPT2Q9H910 190 aa13.86□□□□□ -0.19
LINC01550-201ENST00000499006 KCNIP4Q6PIL6 250 aa13.85□□□□□ -0.19
LINC01550-201ENST00000499006 BORCS7Q96B45 105 aa13.85□□□□□ -0.19
LINC01550-201ENST00000499006 TRGV2A0A075B6R0 118 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 TRAV4A0A0B4J268 109 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 A8MWV9 139 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 RS1O15537 224 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 TWIST1Q15672 202 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 CFAP126Q5VTH2 177 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 URGCP-MRPS24S4R325 110 aa13.84□□□□□ -0.19
LINC01550-201ENST00000499006 TRAV9-1A0A075B6T8 112 aa13.83□□□□□ -0.2
LINC01550-201ENST00000499006 NANOS2P60321 138 aaKnown RBP13.83□□□□□ -0.2
LINC01550-201ENST00000499006 RIGQ13278 110 aa13.83□□□□□ -0.2
LINC01550-201ENST00000499006 A0A1B0GXF2 115 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 CRYGDP07320 174 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 S100PP25815 95 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 UFSP1Q6NVU6 142 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 ATP5L2Q7Z4Y8 100 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 BTF3L4Q96K17 158 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
LINC01550-201ENST00000499006 MRPL54Q6P161 138 aaKnown RBP13.81□□□□□ -0.2
LINC01550-201ENST00000499006 Q6ZTC4 211 aa13.81□□□□□ -0.2
LINC01550-201ENST00000499006 OR4C5Q8NGB2 326 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms