RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 HLA-DMBP28068 263 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 EBI3Q14213 229 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 C1orf140Q5VVS0 124 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 FAM19A2Q8N3H0 131 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 OR10AC1Q8NH08 325 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 RMI2Q96E14 147 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 GPX7Q96SL4 187 aaPredicted RBP4.93□□□□□ -1.62
SNX13-212ENST00000498463 CXCL16Q9H2A7 254 aa4.93□□□□□ -1.62
SNX13-212ENST00000498463 SMIM27A0A1W2PRY6 76 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 CYSRT1A8MQ03 144 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 ATOX1O00244 68 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 CST7O76096 145 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 IGHG2P01859 326 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 FGF6P10767 208 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 COX7CP15954 63 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 ZNF32P17041 273 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 HMGA1P17096 107 aaKnown RBP4.92□□□□□ -1.62
SNX13-212ENST00000498463 CRYGSP22914 178 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 FGF12P61328 243 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 Q96M85 177 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
SNX13-212ENST00000498463 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
SNX13-212ENST00000498463 KIF26AQ9ULI4 1882 aaPredicted RBP4.92□□□□□ -1.62
SNX13-212ENST00000498463 TRAV13-1A0A0B4J241 112 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 MRPS36P82909 103 aaKnown RBP4.91□□□□□ -1.62
SNX13-212ENST00000498463 LYZL2Q7Z4W2 148 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 OR5AS1Q8N127 324 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 DPH3Q96FX2 82 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 PKIGQ9Y2B9 76 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 HILPDAQ9Y5L2 63 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 U3KQK5 164 aa4.91□□□□□ -1.62
SNX13-212ENST00000498463 UBR3Q6ZT12 1888 aa4.9□□□□□ -1.62
SNX13-212ENST00000498463 A0A0B4J2C4 111 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 LOC107984640A0A0U1RRK4 108 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 LOC107986453A0A1B0GWG9 222 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 SH2D1AO60880 128 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 PPYP01298 95 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 PYYP10082 97 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 MGST1P10620 155 aaKnown RBP4.9□□□□□ -1.63
SNX13-212ENST00000498463 IL9P15248 144 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 QRFPP83859 136 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 C12orf74Q32Q52 190 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 KPRPQ5T749 579 aaPredicted RBP4.9□□□□□ -1.63
SNX13-212ENST00000498463 TMEM222Q9H0R3 208 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 V9GYV3 84 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 CPAMD8Q8IZJ3 1885 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 PLXNA4Q9HCM2 1894 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 MYO16Q9Y6X6 1858 aa4.9□□□□□ -1.63
SNX13-212ENST00000498463 IGLV4-60A0A075B6I1 120 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 TCRBV4S1A1TA0A5B7 111 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 F2Z2F3 143 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 NPYP01303 97 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 RBP4P02753 201 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 CD7P09564 240 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 IFI6P09912 130 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 UBE2L3P68036 154 aaKnown RBP4.89□□□□□ -1.63
SNX13-212ENST00000498463 SLC38A11Q08AI6 406 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 HMGN2P46Q86SG4 172 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 RPS19BP1Q86WX3 136 aaKnown RBP4.89□□□□□ -1.63
SNX13-212ENST00000498463 LYPD6Q86Y78 171 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 RPRMLQ8N4K4 120 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 ZFAND2AQ8N6M9 145 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 CYYR1Q96J86 154 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 LINC00477Q96M19 166 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 NHP2Q9NX24 153 aaKnown RBP4.89□□□□□ -1.63
SNX13-212ENST00000498463 TAS2R4Q9NYW5 299 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 PLXNA1Q9UIW2 1896 aa4.89□□□□□ -1.63
SNX13-212ENST00000498463 COL5A3P25940 1745 aaPredicted RBP4.89□□□□□ -1.63
SNX13-212ENST00000498463 TRAV12-2A0A075B6T6 113 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 TRAV4A0A0B4J268 109 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 TRAV40A0A0B4J280 105 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 H3BQ85 93 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 K7EM74 188 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 CCL22O00626 93 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 P0DMU3 169 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 FAM231AP0DMU4 169 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 FAM231CP0DMU5 169 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 KRTAP10-9P60411 292 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 HRCT1Q6UXD1 115 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 TMEM14EPQ6UXP3 125 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 AAED1Q7RTV5 226 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 RPP25LQ8N5L8 163 aaKnown RBP4.88□□□□□ -1.63
SNX13-212ENST00000498463 AGPAT4-IT1Q9H0P7 198 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 TMEM167BQ9NRX6 74 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 PSENENQ9NZ42 101 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 R4GMQ9 66 aa4.88□□□□□ -1.63
SNX13-212ENST00000498463 TRAV27A0A087WT01 109 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 J3QQQ9 107 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 LECT2O14960 151 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 SYNGR2O43760 224 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 IGKCP01834 107 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 COX6A1P12074 109 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 GCHFRP30047 84 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 SSR2P43308 183 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 INSL3P51460 131 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 FOXA3P55318 350 aaPredicted RBP4.87□□□□□ -1.63
SNX13-212ENST00000498463 EIF4EBP1Q13541 118 aaPredicted RBP4.87□□□□□ -1.63
SNX13-212ENST00000498463 VMA21Q3ZAQ7 101 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms