RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DEFB130BP0DP73 79 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 DEFB130AP0DP74 79 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 MED14OSP0DP75 135 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 DAD1P61803 113 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
CPNE1-227ENST00000498056 RNF212Q495C1 297 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 DNLZQ5SXM8 178 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 C10orf91Q5T1B1 145 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 SPXQ9BT56 116 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 PHLDA3Q9Y5J5 127 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 MUC21A0A0G2JKD1 596 aa9.68□□□□□ -0.86
CPNE1-227ENST00000498056 MUC21A0A140T8X8 626 aa9.68□□□□□ -0.86
CPNE1-227ENST00000498056 PPP1R2P9O14990 202 aa9.68□□□□□ -0.86
CPNE1-227ENST00000498056 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
CPNE1-227ENST00000498056 NANOS2P60321 138 aaKnown RBP9.68□□□□□ -0.86
CPNE1-227ENST00000498056 OR10AG1Q8NH19 301 aa9.68□□□□□ -0.86
CPNE1-227ENST00000498056 EDA2RQ9HAV5 297 aa9.68□□□□□ -0.86
CPNE1-227ENST00000498056 TRGV2A0A075B6R0 118 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 SNAI2O43623 268 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 SPINK4O60575 86 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 IGLC6P0CF74 106 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 SSTP61278 116 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 ZNF876PQ49A33 203 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 ZFP82Q8N141 532 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 TSKUQ8WUA8 353 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 TGP01266 2768 aa9.67□□□□□ -0.86
CPNE1-227ENST00000498056 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 HTN3P15516 51 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 CTRLP40313 264 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 Q6ZTC4 211 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 ZNF575Q86XF7 245 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 SVBPQ8N300 66 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 CLRN3Q8NCR9 226 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 GTSF1Q8WW33 167 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 ANAPC16Q96DE5 110 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 PGLYRP4Q96LB8 373 aa9.66□□□□□ -0.86
CPNE1-227ENST00000498056 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 SNAPINO95295 136 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 RHEBQ15382 184 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 LGALS9BQ3B8N2 356 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 LYZL1Q6UWQ5 148 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
CPNE1-227ENST00000498056 CACNG7P62955 275 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 C12orf74Q32Q52 190 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 RASL10AQ92737 203 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 GFRA4Q9GZZ7 299 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 RPS10P5Q9NQ39 176 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 NAT8BQ9UHF3 227 aa9.64□□□□□ -0.87
CPNE1-227ENST00000498056 C7orf77A4D0Y5 90 aa9.63□□□□□ -0.87
CPNE1-227ENST00000498056 F2Z2F3 143 aa9.63□□□□□ -0.87
CPNE1-227ENST00000498056 NXPH4O95158 308 aa9.63□□□□□ -0.87
CPNE1-227ENST00000498056 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
CPNE1-227ENST00000498056 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
CPNE1-227ENST00000498056 TRAV4A0A0B4J268 109 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 ATP5G1P05496 136 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 FAM74A4Q5TZK3 123 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
CPNE1-227ENST00000498056 CTDSP1Q9GZU7 261 aa9.62□□□□□ -0.87
CPNE1-227ENST00000498056 A8MWV9 139 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 TWIST1Q15672 202 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 PTH2Q96A98 100 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 NDUFAF3Q9BU61 184 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 JPT2Q9H910 190 aa9.61□□□□□ -0.87
CPNE1-227ENST00000498056 A0A087WWL8 130 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 TRAV10A0A0B4J240 114 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 A0A1B0GUT8 65 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 F5H768 121 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 NTF3P20783 257 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 CFAP126Q5VTH2 177 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 MRPL54Q6P161 138 aaKnown RBP9.6□□□□□ -0.87
CPNE1-227ENST00000498056 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 ZNF479Q96JC4 524 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
CPNE1-227ENST00000498056 DNAH7Q8WXX0 4024 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 A0A087WWC5 75 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 RHODO00212 210 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 RS1O15537 224 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 MGPP08493 103 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 TRGC1P0CF51 173 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 SMIM17P0DL12 118 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 S100PP25815 95 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 FAM3BP58499 235 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-227ENST00000498056 ZNF56Q15929 161 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 PIK3CD-AS1Q5SR53 167 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms