RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZZEF1O43149 2961 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 CRYBG3Q68DQ2 2970 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 C2CD3Q4AC94 2353 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 ABCA4P78363 2273 aa-0.26□□□□□ -2.45
SMC4-227ENST00000497984 TRIOO75962 3097 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 TPRP12270 2363 aaKnown RBP-0.27□□□□□ -2.45
SMC4-227ENST00000497984 FAM135BQ49AJ0 1406 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 CPDO75976 1380 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 WNK2Q9Y3S1 2297 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 LOC107986453A0A1B0GWG9 222 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 MAP1LC3B2A6NCE7 125 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 TPST1O60507 370 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 EDF1O60869 148 aaKnown RBP-0.27□□□□□ -2.45
SMC4-227ENST00000497984 SLC25A4P12235 298 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 IL7P13232 177 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 SPRR2EP22531 72 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 SPRR2BP35325 72 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 SPRR2AP35326 72 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 KLKP1Q107X0 134 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 C3orf33Q6P1S2 294 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.27□□□□□ -2.45
SMC4-227ENST00000497984 OR8J3Q8NGG0 315 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 BOLA2Q9H3K6 86 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 C19orf12Q9NSK7 152 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 TMEM14BQ9NUH8 114 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 GID8Q9NWU2 228 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 DNAH6Q9C0G6 4158 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 FREM2Q5SZK8 3169 aa-0.27□□□□□ -2.45
SMC4-227ENST00000497984 YTHDC2Q9H6S0 1430 aaKnown RBP-0.28□□□□□ -2.45
SMC4-227ENST00000497984 FRYQ5TBA9 3013 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 DMXL1Q9Y485 3027 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 CNOT1A5YKK6 2376 aaKnown RBP-0.28□□□□□ -2.45
SMC4-227ENST00000497984 TRAV13-1A0A0B4J241 112 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 TMEM189A5PLL7 270 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 PPP5D1E7EU14 171 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 MPC1LP0DKB6 136 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 GTF2A1P52655 376 aaPredicted RBP-0.28□□□□□ -2.45
SMC4-227ENST00000497984 BLCAPP62952 87 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 TMEM78Q5T7P6 136 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 OR51A4Q8NGJ6 313 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 DMAC1Q96GE9 116 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 SPEGQ15772 3267 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 EYSQ5T1H1 3165 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 SVEP1Q4LDE5 3571 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 DNAH2Q9P225 4427 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 PKHD1L1Q86WI1 4243 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 DNAH5Q8TE73 4624 aa-0.28□□□□□ -2.45
SMC4-227ENST00000497984 CEP350Q5VT06 3117 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.29□□□□□ -2.46
SMC4-227ENST00000497984 ADGRG4Q8IZF6 3080 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 DCHS2Q6V1P9 2916 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 BCORL1Q5H9F3 1711 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 SPG11Q96JI7 2443 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 A0A0G2JMM0 328 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 A0A1W2PRE2 83 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 IFITM5A6NNB3 132 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 H3BMG7 143 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 CRYGSP22914 178 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 RHOHQ15669 191 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 IQCJQ1A5X6 159 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 STX12Q86Y82 276 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 CDC26Q8NHZ8 85 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 LAMTOR2Q9Y2Q5 125 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 PTPRDP23468 1912 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 NUP210LQ5VU65 1888 aa-0.29□□□□□ -2.46
SMC4-227ENST00000497984 APOBP04114 4563 aaKnown RBP-0.29□□□□□ -2.46
SMC4-227ENST00000497984 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.29□□□□□ -2.46
SMC4-227ENST00000497984 CHD3Q12873 2000 aaKnown RBP-0.3□□□□□ -2.46
SMC4-227ENST00000497984 APC2O95996 2303 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.3□□□□□ -2.46
SMC4-227ENST00000497984 TRBV7-6A0A0J9YX20 115 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 G0S2P27469 103 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 ZGRF1Q86YA3 2104 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 SMIM7Q9BQ49 75 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 LXNQ9BS40 222 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 CBLN4Q9NTU7 201 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 MED31Q9Y3C7 131 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 CMYA5Q8N3K9 4069 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 ZDBF2Q9HCK1 2354 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 UBR2Q8IWV8 1755 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 REV3LO60673 3130 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 MUC3AQ02505 3323 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 ANK3Q12955 4377 aaKnown RBP-0.3□□□□□ -2.46
SMC4-227ENST00000497984 CEP290O15078 2479 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 USP54Q70EL1 1684 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 ADGBQ8N7X0 1667 aa-0.3□□□□□ -2.46
SMC4-227ENST00000497984 WNK1Q9H4A3 2382 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 RELNP78509 3460 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 SZT2Q5T011 3432 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 LOC107984640A0A0U1RRK4 108 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 CCKP06307 115 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 ETV6P41212 452 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 Q5XG85 94 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 TRIQKQ629K1 86 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 OR5A2Q8NGI9 324 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 CCDC32Q9BV29 185 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 ATG5Q9H1Y0 275 aa-0.31□□□□□ -2.46
SMC4-227ENST00000497984 CDK12Q9NYV4 1490 aaPredicted RBP-0.31□□□□□ -2.46
SMC4-227ENST00000497984 SYNMO15061 1565 aa-0.32□□□□□ -2.46
SMC4-227ENST00000497984 C5orf42Q9H799 3197 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms