RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 C7orf65Q6ZTY9 151 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 AQP3Q92482 292 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 PRELID3AQ96N28 172 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 BANF2Q9H503 90 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 CCDC88CQ9P219 2028 aa3.6□□□□□ -1.83
BRCA1-224ENST00000497488 MDC1Q14676 2089 aaKnown RBP3.59□□□□□ -1.83
BRCA1-224ENST00000497488 HEATR5BQ9P2D3 2071 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 COLCA2A8K830 154 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 SSR2P43308 183 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 KRTAP10-9P60411 292 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 HES1Q14469 280 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 TAF9Q16594 264 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 FAM27BQ5VT28 67 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 IGFL3Q6UXB1 125 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 Q6ZS92 163 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 C4orf33Q8N1A6 199 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 MORN4Q8NDC4 146 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 PLPP5Q8NEB5 264 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 MRPL57Q9BQC6 102 aaKnown RBP3.59□□□□□ -1.83
BRCA1-224ENST00000497488 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 NIT2Q9NQR4 276 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 ANAPC11Q9NYG5 84 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 R4GN34 69 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 PIEZO2Q9H5I5 2752 aa3.59□□□□□ -1.83
BRCA1-224ENST00000497488 MED13Q9UHV7 2174 aa3.59□□□□□ -1.84
BRCA1-224ENST00000497488 ZNF462Q96JM2 2506 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 SDCBPO00560 298 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-224ENST00000497488 CPSF4O95639 269 aaKnown RBP3.58□□□□□ -1.84
BRCA1-224ENST00000497488 MT-ND6P03923 174 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 CLPSP04118 112 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 TCRAP04437 139 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 CRYGAP11844 174 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 AZU1P20160 251 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-224ENST00000497488 DIAPH2-AS1Q14236 149 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 OCIAD2Q56VL3 154 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 PABPC1L2AQ5JQF8 200 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 SCIMPQ6UWF3 145 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 SLC35E3Q7Z769 313 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 ZNF418Q8TF45 676 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-224ENST00000497488 DIRC1Q969H9 104 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 HHLA3Q9XRX5 114 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 TENM4Q6N022 2769 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 SCN3AQ9NY46 2000 aa3.58□□□□□ -1.84
BRCA1-224ENST00000497488 OR2T8A6NH00 312 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 SLC25A5P05141 298 aaKnown RBP3.57□□□□□ -1.84
BRCA1-224ENST00000497488 UQCRHP07919 91 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 AKR1D1P51857 326 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 TMEM155Q4W5P6 130 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 RNASE10Q5GAN6 216 aaKnown RBP3.57□□□□□ -1.84
BRCA1-224ENST00000497488 COMMD6Q7Z4G1 85 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 CPAMD8Q8IZJ3 1885 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 MRPS24Q96EL2 167 aaKnown RBP3.57□□□□□ -1.84
BRCA1-224ENST00000497488 C14orf144Q96I85 54 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 COL12A1Q99715 3063 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 BCL2L10Q9HD36 194 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 KLK12Q9UKR0 248 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 HSPE1-MOB4S4R3N1 261 aa3.57□□□□□ -1.84
BRCA1-224ENST00000497488 COL6A6A6NMZ7 2263 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 IGHV1-18A0A0C4DH31 117 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 A0A0G2JMM0 328 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 A0A1W2PPB8 328 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 A0A1W2PRS3 328 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 KIR3DP1A8MWS1 328 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 A8MWV9 139 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 ZNF670-ZNF695F2Z2N8 137 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 F6UZH7 168 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 UQCRQO14949 82 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 TIMM17BO60830 172 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 IGKV3-11P04433 115 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 SMIM6P0DI80 62 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 GLIPR1L1Q6UWM5 242 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 LCN15Q6UWW0 184 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 ZCCHC23Q6ZST2 131 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 RPS19BP1Q86WX3 136 aaKnown RBP3.56□□□□□ -1.84
BRCA1-224ENST00000497488 OR4B1Q8NGF8 309 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 NHP2Q9NX24 153 aaKnown RBP3.56□□□□□ -1.84
BRCA1-224ENST00000497488 COA4Q9NYJ1 87 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 SEC16AO15027 2179 aa3.56□□□□□ -1.84
BRCA1-224ENST00000497488 GCN1Q92616 2671 aaKnown RBP3.56□□□□□ -1.84
BRCA1-224ENST00000497488 TLN1Q9Y490 2541 aaKnown RBP3.55□□□□□ -1.84
BRCA1-224ENST00000497488 DOCK10Q96BY6 2186 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 SHANK1Q9Y566 2161 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 UBR5O95071 2799 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-224ENST00000497488 TRAV17A0A0B4J275 112 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 A0A0J9YX75 114 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 FAM236AA0A1B0GUQ0 79 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 FAM236BA0A1B0GV22 79 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 PSCAO43653 123 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 SYNGR2O43760 224 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 GAS8-AS1O95177 125 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 METTL15P1P0C7V9 234 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 ZNF705BP0CI00 300 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-224ENST00000497488 KLRD1Q13241 179 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 SLC48A1Q6P1K1 146 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 OR10AC1Q8NH08 325 aa3.55□□□□□ -1.84
BRCA1-224ENST00000497488 NAA38Q9BRA0 125 aaKnown RBP3.55□□□□□ -1.84
BRCA1-224ENST00000497488 DNAJC15Q9Y5T4 150 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms