RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SGPP2Q8IWX5 399 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 C10orf111Q8N326 155 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 OR51A4Q8NGJ6 313 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 FNDC9Q8TBE3 224 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 FAM213BQ8TBF2 198 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 MRPL30Q8TCC3 161 aaKnown RBP2.86□□□□□ -1.95
SF3B1-212ENST00000496458 RPS4Y2Q8TD47 263 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 CST11Q9H112 138 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 SOX21Q9Y651 276 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-212ENST00000496458 SPCS1Q9Y6A9 102 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 MUC22E2RYF6 1773 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-212ENST00000496458 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
SF3B1-212ENST00000496458 MGAQ8IWI9 3026 aa2.86□□□□□ -1.95
SF3B1-212ENST00000496458 ITPR1Q14643 2758 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 PTPRQQ9UMZ3 2332 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 TNRC6BQ9UPQ9 1833 aaKnown RBP2.85□□□□□ -1.95
SF3B1-212ENST00000496458 TRGV10A0A0A0MS01 117 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 IGHV3-49A0A0A0MS15 119 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 TRAV4A0A0B4J268 109 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 LOC102725191A0A1B0GVB3 256 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 FNDC10F2Z333 226 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 LST1O00453 97 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 COX7A2LO14548 114 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 HLA-DQA1P01909 254 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 GYPAP02724 150 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 MT-ND6P03923 174 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 C3orf79P0CE67 100 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 BCL2P10415 239 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 RPL38P63173 70 aaKnown RBP2.85□□□□□ -1.95
SF3B1-212ENST00000496458 CATR1Q13166 79 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 CDK5R1Q15078 307 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF791Q3KP31 576 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-212ENST00000496458 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 Q6AWC8 147 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 NTM-AS1Q6ZSK4 140 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 SLC22A24Q8N4F4 322 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 SGMS2Q8NHU3 365 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF563Q8TA94 476 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 OR5P3Q8WZ94 311 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 PBOV1Q9GZY1 135 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 PLXNA2O75051 1894 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 CELSR3Q9NYQ7 3312 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 MYLKQ15746 1914 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 MYO18BQ8IUG5 2567 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 PCDH15Q96QU1 1955 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 IGSF10Q6WRI0 2623 aa2.85□□□□□ -1.95
SF3B1-212ENST00000496458 ASPMQ8IZT6 3477 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 TRBV19A0A075B6N1 114 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 CXorf51AA0A1B0GTR3 108 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 A8MUN3 132 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 C9JAW5 83 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF737O75373 536 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 OR2H2O95918 312 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 CXorf1O96002 111 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 CD7P09564 240 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 SCTP09683 121 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 IFITM1P13164 125 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 NTF3P20783 257 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 CMC4P56277 68 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-212ENST00000496458 FGF12P61328 243 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 CCL20P78556 96 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF117Q03924 483 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 PSMG4Q5JS54 123 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 BAGE3Q86Y29 109 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 BAGE2Q86Y30 109 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 OR8B3Q8NGG8 313 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
SF3B1-212ENST00000496458 IGF2BP2-AS1Q96M15 143 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 OR8B2Q96RD0 313 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 NMNAT3Q96T66 252 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 B9D2Q9BPU9 175 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF286AQ9HBT8 521 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 HIGD1AQ9Y241 93 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 CCDC88CQ9P219 2028 aa2.84□□□□□ -1.95
SF3B1-212ENST00000496458 LAMA5O15230 3695 aa2.84□□□□□ -1.96
SF3B1-212ENST00000496458 KALRNO60229 2985 aa2.84□□□□□ -1.96
SF3B1-212ENST00000496458 CFAP46Q8IYW2 2715 aa2.84□□□□□ -1.96
SF3B1-212ENST00000496458 SPTAN1Q13813 2472 aaKnown RBP2.83□□□□□ -1.96
SF3B1-212ENST00000496458 IGHV3OR15-7A0A075B7D8 119 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 IGHV3-43A0A0B4J1X8 118 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 IGKV1-12A0A0C4DH73 117 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 H3BMG7 143 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 SYS1-DBNDD2H3BUS1 97 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 H3BUT2 72 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 PITX3O75364 302 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 IGKV1D-12P01611 117 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 MT-ATP8P03928 68 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 RPL7P18124 248 aaKnown RBP2.83□□□□□ -1.96
SF3B1-212ENST00000496458 BLVRBP30043 206 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-212ENST00000496458 ASIPP42127 132 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 ATP5G3P48201 142 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 EMP1P54849 157 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 RPS11P62280 158 aaKnown RBP eCLIP2.83□□□□□ -1.96
SF3B1-212ENST00000496458 MEIG1Q5JSS6 88 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 SPATA12Q7Z6I5 190 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 EXOC3-AS1Q8N2X6 119 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 OR4X2Q8NGF9 303 aa2.83□□□□□ -1.96
SF3B1-212ENST00000496458 OR5D14Q8NGL3 314 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms