RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 TMEM8BA6NDV4 472 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 K7EP13 123 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 OVOL1O14753 267 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 TAX1BP3O14907 124 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 SRSF2Q01130 221 aaKnown RBP8.69□□□□□ -1.02
CDCA7-208ENST00000496441 GAGE1Q13065 139 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 KHDC1LQ5JSQ8 128 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 AMMECR1LQ6DCA0 310 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 SMPXQ9UHP9 88 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 C2CD3Q4AC94 2353 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 TENM4Q6N022 2769 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 F5H697 171 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 LAGE3Q14657 143 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 Q8N8P6 123 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 OR4C5Q8NGB2 326 aa8.69□□□□□ -1.02
CDCA7-208ENST00000496441 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
CDCA7-208ENST00000496441 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 CD7P09564 240 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 COX6B1P14854 86 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 CRIP2P52943 208 aaPredicted RBP8.68□□□□□ -1.02
CDCA7-208ENST00000496441 ZC2HC1BQ5TFG8 222 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 LINC01356Q8N9X3 169 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 MRPL35Q9NZE8 188 aaKnown RBP8.68□□□□□ -1.02
CDCA7-208ENST00000496441 FGF6P10767 208 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 ODF1Q14990 250 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 MYOZ3Q8TDC0 251 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 ORAOV1Q8WV07 137 aa8.68□□□□□ -1.02
CDCA7-208ENST00000496441 C18orf65Q6ZTR6 163 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 DPF1Q92782 380 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 HOXA3O43365 443 aaPredicted RBP8.67□□□□□ -1.02
CDCA7-208ENST00000496441 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 FAM159AQ6UWV7 190 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 IGKCP01834 107 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 PSMB8P28062 276 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 EMP1P54849 157 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 SPINK13Q1W4C9 94 aa8.67□□□□□ -1.02
CDCA7-208ENST00000496441 RNASE3P12724 160 aaKnown RBP8.66□□□□□ -1.02
CDCA7-208ENST00000496441 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
CDCA7-208ENST00000496441 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
CDCA7-208ENST00000496441 RASL10AQ92737 203 aa8.66□□□□□ -1.02
CDCA7-208ENST00000496441 PRM2P04554 102 aa8.66□□□□□ -1.02
CDCA7-208ENST00000496441 GCSHP23434 173 aa8.66□□□□□ -1.02
CDCA7-208ENST00000496441 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.023e-7■■■■□ 20.7
CDCA7-208ENST00000496441 IGHV4OR15-8A0A075B7B6 117 aa8.65□□□□□ -1.02
CDCA7-208ENST00000496441 A0A087WW49 117 aa8.65□□□□□ -1.02
CDCA7-208ENST00000496441 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
CDCA7-208ENST00000496441 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
CDCA7-208ENST00000496441 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
CDCA7-208ENST00000496441 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
CDCA7-208ENST00000496441 H3BUA1 57 aa8.65□□□□□ -1.03
CDCA7-208ENST00000496441 CFHR3Q02985 330 aa8.65□□□□□ -1.03
CDCA7-208ENST00000496441 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.03
CDCA7-208ENST00000496441 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.03
CDCA7-208ENST00000496441 DPH3P1Q9H4G8 78 aa8.65□□□□□ -1.03
CDCA7-208ENST00000496441 ID1P41134 155 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 SCGB3A1Q96QR1 104 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 HELZ2Q9BYK8 2649 aaKnown RBP8.64□□□□□ -1.03
CDCA7-208ENST00000496441 DPM2O94777 84 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 CR1P17927 2039 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
CDCA7-208ENST00000496441 H3BUT2 72 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 SLC25A16P16260 332 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 AP1S3Q96PC3 154 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 CSTL1Q9H114 145 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
CDCA7-208ENST00000496441 AKAP9Q99996 3911 aa8.63□□□□□ -1.03
CDCA7-208ENST00000496441 HOXD3P31249 432 aaPredicted RBP8.63□□□□□ -1.03
CDCA7-208ENST00000496441 SLURP1P55000 103 aa8.63□□□□□ -1.03
CDCA7-208ENST00000496441 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
CDCA7-208ENST00000496441 ATP6V0BQ99437 205 aa8.63□□□□□ -1.03
CDCA7-208ENST00000496441 RNF151Q2KHN1 245 aa8.63□□□□□ -1.03
CDCA7-208ENST00000496441 ZNF256Q9Y2P7 627 aaPredicted RBP8.63□□□□□ -1.03
CDCA7-208ENST00000496441 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 K7ERJ3 54 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 Q5PR19 223 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 OR1N2Q8NGR9 330 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 ATP5LO75964 103 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 SNRPD3P62318 126 aaKnown RBP8.62□□□□□ -1.03
CDCA7-208ENST00000496441 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 Q96MF0 132 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 VPREB3Q9UKI3 123 aa8.62□□□□□ -1.03
CDCA7-208ENST00000496441 IGHV4-4A0A075B6R2 117 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 GATA3P23771 443 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 MAPKAPK5-AS1Q8N8E1 139 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 MRAP2Q96G30 205 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 DSCR9P59020 149 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
CDCA7-208ENST00000496441 ZNF56Q15929 161 aa8.61□□□□□ -1.03
CDCA7-208ENST00000496441 ADAMTSL5Q6ZMM2 481 aa8.6□□□□□ -1.03
CDCA7-208ENST00000496441 Q8N1Y9 231 aa8.6□□□□□ -1.03
CDCA7-208ENST00000496441 ZNF843Q8N446 348 aa8.6□□□□□ -1.03
CDCA7-208ENST00000496441 TRBV25-1A0A075B6N4 114 aa8.6□□□□□ -1.03
CDCA7-208ENST00000496441 A0A096LNT2 108 aa8.6□□□□□ -1.03
CDCA7-208ENST00000496441 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
CDCA7-208ENST00000496441 IGHV4-31P0DP07 118 aa8.6□□□□□ -1.03
CDCA7-208ENST00000496441 FXYD2P54710 66 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms