RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
CXCL12-208ENST00000496375 GNG13Q9P2W3 67 aa10.02□□□□□ -0.81
CXCL12-208ENST00000496375 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 SNURFLB1AK76 121 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 GCGP01275 180 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 BCL2P10415 239 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 AKR1C3P42330 323 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 UBE2G1P62253 170 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 MEF2BQ02080 365 aaPredicted RBP10.01□□□□□ -0.81
CXCL12-208ENST00000496375 OR5I1Q13606 314 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 FAM74A3Q4VXF1 159 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
CXCL12-208ENST00000496375 TRGV11A0A075B6L2 103 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 SPINK4O60575 86 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 ZNF415Q09FC8 603 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 RHEBQ15382 184 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 KCNS1Q96KK3 526 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 MLST8Q9BVC4 326 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
CXCL12-208ENST00000496375 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 A0A0J9YY99 117 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 LOC105371267A0A1B0GV96 52 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 GAGE12BA1L429 117 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 C16orf90A8MZG2 172 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 PDE6DO43924 150 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 GAGE7O76087 117 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 SRP19P09132 144 aaKnown RBP9.99□□□□□ -0.81
CXCL12-208ENST00000496375 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 MUC21Q5SSG8 566 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 TMEM183AQ8IXX5 376 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 VAX2Q9UIW0 290 aa9.99□□□□□ -0.81
CXCL12-208ENST00000496375 IGHV3-16A0A0C4DH30 117 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 M0R036 132 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 TYMSP04818 313 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 HOXA5P20719 270 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 CRIP1P50238 77 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 ZC2HC1AQ96GY0 325 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 SPXQ9BT56 116 aa9.98□□□□□ -0.81
CXCL12-208ENST00000496375 C7orf77A4D0Y5 90 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 FABP5P3A8MUU1 101 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 ZNF674Q2M3X9 581 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 Q9H8V8 135 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 RPS10P5Q9NQ39 176 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
CXCL12-208ENST00000496375 RPL35P42766 123 aaKnown RBP9.96□□□□□ -0.82
CXCL12-208ENST00000496375 DNLZQ5SXM8 178 aa9.96□□□□□ -0.82
CXCL12-208ENST00000496375 Q6ZTI0 123 aa9.96□□□□□ -0.82
CXCL12-208ENST00000496375 IGKV3D-20A0A0C4DH25 116 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 B4DEV8 164 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 GNRH2O43555 120 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 ESRGQ1W209 222 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 FAM162BQ5T6X4 162 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 BAGE2Q86Y30 109 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 CBLN2Q8IUK8 224 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 RASL10AQ92737 203 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 PTH2Q96A98 100 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 C9orf85Q96MD7 179 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 KRTAP1-5Q9BYS1 174 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 NAGKQ9UJ70 344 aa9.95□□□□□ -0.82
CXCL12-208ENST00000496375 A0A087WWC5 75 aa9.94□□□□□ -0.82
CXCL12-208ENST00000496375 TMEM250H0YL14 139 aa9.94□□□□□ -0.82
CXCL12-208ENST00000496375 SH2D1AO60880 128 aa9.94□□□□□ -0.82
CXCL12-208ENST00000496375 PNRC1Q12796 327 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-208ENST00000496375 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
CXCL12-208ENST00000496375 TTC32Q5I0X7 151 aa9.94□□□□□ -0.82
CXCL12-208ENST00000496375 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
CXCL12-208ENST00000496375 TRBV20OR9-2A0A075B6H5 130 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 H3BNG1 76 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 MT-ND4LP03901 98 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 CXCL1P09341 107 aa9.93□□□□□ -0.82
CXCL12-208ENST00000496375 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
CXCL12-208ENST00000496375 MRPS16Q9Y3D3 137 aaKnown RBP9.93□□□□□ -0.82
CXCL12-208ENST00000496375 TRGV2A0A075B6R0 118 aa9.92□□□□□ -0.82
CXCL12-208ENST00000496375 COLCA2A8K830 154 aa9.92□□□□□ -0.82
CXCL12-208ENST00000496375 M0R2P5 195 aa9.92□□□□□ -0.82
CXCL12-208ENST00000496375 CENPWQ5EE01 88 aa9.92□□□□□ -0.82
CXCL12-208ENST00000496375 PIK3CD-AS1Q5SR53 167 aa9.92□□□□□ -0.82
CXCL12-208ENST00000496375 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
CXCL12-208ENST00000496375 MRPL16Q9NX20 251 aaKnown RBP9.92□□□□□ -0.82
CXCL12-208ENST00000496375 C9JCJ5 164 aa9.91□□□□□ -0.82
CXCL12-208ENST00000496375 NHLRC2Q8NBF2 726 aa9.91□□□□□ -0.82
CXCL12-208ENST00000496375 VSIG2Q96IQ7 327 aa9.91□□□□□ -0.82
CXCL12-208ENST00000496375 IL36BQ9NZH7 164 aa9.91□□□□□ -0.82
CXCL12-208ENST00000496375 A0A096LPF7 62 aa9.9□□□□□ -0.82
CXCL12-208ENST00000496375 A0A1W2PPQ1 181 aa9.9□□□□□ -0.82
CXCL12-208ENST00000496375 CEBPGP53567 150 aa9.9□□□□□ -0.82
CXCL12-208ENST00000496375 MAPKAPK5-AS1Q8N8E1 139 aa9.9□□□□□ -0.82
CXCL12-208ENST00000496375 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
CXCL12-208ENST00000496375 ORM1P02763 201 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms