RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 CD7P09564 240 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
VPS13B-206ENST00000496144 LYZL1Q6UWQ5 148 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 MS4A6AQ9H2W1 248 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 LINC01559Q495D7 138 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 IGLC6P0CF74 106 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 TDRG1Q3Y452 100 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 MRPL52Q86TS9 123 aaKnown RBP6.34□□□□□ -1.39
VPS13B-206ENST00000496144 TRAV9-2A0A087WT02 112 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 CENPEQ02224 2701 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 SMIM9A6NGZ8 99 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 RAB4AP20338 218 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 NTF3P20783 257 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 CCL18P55774 89 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-206ENST00000496144 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 TNCP24821 2201 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 SPATA12Q7Z6I5 190 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 APRG1Q8IVJ8 170 aa6.34□□□□□ -1.39
VPS13B-206ENST00000496144 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-206ENST00000496144 SOCS3O14543 225 aa6.34□□□□□ -1.4
VPS13B-206ENST00000496144 MIEN1Q9BRT3 115 aa6.34□□□□□ -1.4
VPS13B-206ENST00000496144 HSBP1O75506 76 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 LINC00614P0C842 121 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 SPATA45Q537H7 98 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 MAP6D1Q9H9H5 199 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 LBHQ53QV2 105 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-206ENST00000496144 FER1L6-AS1Q8NA97 138 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 SVEP1Q4LDE5 3571 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 TMEM213A2RRL7 107 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 CASC10Q5T4H9 136 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 RETNQ9HD89 108 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 XCL2Q9UBD3 114 aa6.33□□□□□ -1.4
VPS13B-206ENST00000496144 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-206ENST00000496144 UNQ9165/PRO28630Q6UXU0 137 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 KNCNA6PVL3 124 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 TMEM78Q5T7P6 136 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 FAM104BQ5XKR9 115 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 TRGV2A0A075B6R0 118 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 LINC01546A6NGU7 62 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 FABP5P3A8MUU1 101 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 F5H768 121 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 TWIST1Q15672 202 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 PAM16Q9Y3D7 125 aa6.32□□□□□ -1.4
VPS13B-206ENST00000496144 ZNF138P52744 262 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 SETD2Q9BYW2 2564 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-206ENST00000496144 NUDT3O95989 172 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 C15orf53Q8NAA6 179 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 AGPAT4-IT1Q9H0P7 198 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 OR5AL1P0C617 328 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 MRPL51Q4U2R6 128 aaKnown RBP6.31□□□□□ -1.4
VPS13B-206ENST00000496144 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 D6R8Y8 96 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 FAM19A4Q96LR4 140 aa6.31□□□□□ -1.4
VPS13B-206ENST00000496144 C20orf202A1L168 122 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 TTC32Q5I0X7 151 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 RNF185Q96GF1 192 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 ORM1P02763 201 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-206ENST00000496144 IGKV3D-20A0A0C4DH25 116 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 AMN1Q8IY45 258 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 HSPB8Q9UJY1 196 aa6.3□□□□□ -1.4
VPS13B-206ENST00000496144 PDZD2O15018 2839 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 A0A1B0GV90 55 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 PRELID3AQ96N28 172 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 SYS1-DBNDD2H3BUS1 97 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 LINC00173Q6ZV60 143 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 LCE6AA0A183 80 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 M0R143 59 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 LEPROTL1O95214 131 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 MAJINQ3KP22 176 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 ORMDL3Q8N138 153 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 MAP1LC3CQ9BXW4 147 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 LENEPQ9Y5L5 61 aa6.29□□□□□ -1.4
VPS13B-206ENST00000496144 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-206ENST00000496144 PLXNB1O43157 2135 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 CBY3A6NI87 242 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 PRR9Q5T870 116 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 ATP5G1P05496 136 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 FXYD7P58549 80 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 PET117Q6UWS5 81 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 LINC00477Q96M19 166 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 AKAP9Q99996 3911 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 MUC21A0A0G2JKD1 596 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 MUC21A0A140T8X8 626 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 J3KRW8 73 aa6.28□□□□□ -1.4
VPS13B-206ENST00000496144 PSCAO43653 123 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms