RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 Q9HAA7 133 aa12.37□□□□□ -0.43
CLCNKA-207ENST00000495784 IGLV5-52A0A0A0MRZ9 124 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 PTTG1O95997 202 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 IGHV3-30P01768 117 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 IGHV3-30-3P0DP02 117 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 IGHV3-30-5P0DP03 117 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 LELP1Q5T871 98 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 INO80EQ8NBZ0 244 aaPredicted RBP12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 ATP6V0E2Q8NHE4 81 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 FAT1Q14517 4588 aa12.36□□□□□ -0.43
CLCNKA-207ENST00000495784 A0A1W2PRE2 83 aa12.35□□□□□ -0.43
CLCNKA-207ENST00000495784 IFNA7P01567 189 aa12.35□□□□□ -0.43
CLCNKA-207ENST00000495784 INAFM2P0DMQ5 153 aa12.35□□□□□ -0.43
CLCNKA-207ENST00000495784 S100A4P26447 101 aaKnown RBP12.35□□□□□ -0.43
CLCNKA-207ENST00000495784 Q5VSD8 79 aa12.35□□□□□ -0.43
CLCNKA-207ENST00000495784 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 TRAV34A0A0B4J273 112 aa12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 LRCOL1A6NCL2 159 aa12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 Q5BKY6 102 aa12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 NTN5Q8WTR8 489 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
CLCNKA-207ENST00000495784 A8MWV9 139 aa12.33□□□□□ -0.44
CLCNKA-207ENST00000495784 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
CLCNKA-207ENST00000495784 LGALSLQ3ZCW2 172 aaPredicted RBP12.33□□□□□ -0.44
CLCNKA-207ENST00000495784 PARLQ9H300 379 aa12.33□□□□□ -0.44
CLCNKA-207ENST00000495784 BATF3Q9NR55 127 aa12.33□□□□□ -0.44
CLCNKA-207ENST00000495784 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
CLCNKA-207ENST00000495784 FXYD6-FXYD2A0A087WZ82 144 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 FABP5P3A8MUU1 101 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 ASIPP42127 132 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 UBE2G2P60604 165 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 Q8N814 137 aa12.32□□□□□ -0.44
CLCNKA-207ENST00000495784 CTXND1A0A1B0GTU2 59 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 PEX7O00628 323 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 GAGE1Q13065 139 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 GAGE4Q13068 117 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 GAGE5Q13069 117 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 LAGE3Q14657 143 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 ZNF726P1Q15940 193 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 GAGE13Q4V321 117 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 Q6ZSN1 163 aa12.31□□□□□ -0.44
CLCNKA-207ENST00000495784 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
CLCNKA-207ENST00000495784 SMR3BP02814 79 aaPredicted RBP12.3□□□□□ -0.44
CLCNKA-207ENST00000495784 PIK3CD-AS1Q5SR53 167 aa12.3□□□□□ -0.44
CLCNKA-207ENST00000495784 Q86TA4 180 aa12.3□□□□□ -0.44
CLCNKA-207ENST00000495784 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
CLCNKA-207ENST00000495784 TM2D2Q9BX73 214 aa12.3□□□□□ -0.44
CLCNKA-207ENST00000495784 B4DEV8 164 aa12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 HAMPP81172 84 aa12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 AKR1C8PQ5T2L2 129 aa12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 NKX6-2Q9C056 277 aaPredicted RBP12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 IL36BQ9NZH7 164 aa12.29□□□□□ -0.44
CLCNKA-207ENST00000495784 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
CLCNKA-207ENST00000495784 H3BVH4 76 aa12.28□□□□□ -0.44
CLCNKA-207ENST00000495784 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
CLCNKA-207ENST00000495784 SYT8Q8NBV8 401 aa12.28□□□□□ -0.44
CLCNKA-207ENST00000495784 FAM74A7A6NL05 159 aa12.27□□□□□ -0.45
CLCNKA-207ENST00000495784 M0R036 132 aa12.27□□□□□ -0.45
CLCNKA-207ENST00000495784 LINC00694P0DN24 101 aa12.27□□□□□ -0.45
CLCNKA-207ENST00000495784 Q8N3U1 123 aa12.27□□□□□ -0.45
CLCNKA-207ENST00000495784 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
CLCNKA-207ENST00000495784 HERC1Q15751 4861 aa12.27□□□□□ -0.45
CLCNKA-207ENST00000495784 A0A087WWC5 75 aa12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 RHODO00212 210 aa12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 C14orf178Q8N769 122 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 JPT2Q9H910 190 aa12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
CLCNKA-207ENST00000495784 KRBOX1C9JBD0 128 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 SH2D1AO60880 128 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 ARMS2P0C7Q2 107 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 TOR2AQ5JU69 321 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 OR11H4Q8NGC9 324 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 ZC2HC1AQ96GY0 325 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 Q9UF83 564 aa12.25□□□□□ -0.45
CLCNKA-207ENST00000495784 GRIFINA4D1Z8 144 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 CRIP1P50238 77 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 UBE2G1P62253 170 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 FAM162BQ5T6X4 162 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 UFSP1Q6NVU6 142 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 DAZ4Q86SG3 579 aaKnown RBP12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 DAZ3Q9NR90 486 aaKnown RBP12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 DMBT1Q9UGM3 2413 aaPredicted RBP12.24□□□□□ -0.45
CLCNKA-207ENST00000495784 DNLZQ5SXM8 178 aa12.23□□□□□ -0.45
CLCNKA-207ENST00000495784 FMC1Q96HJ9 113 aa12.23□□□□□ -0.45
CLCNKA-207ENST00000495784 PHLDA3Q9Y5J5 127 aa12.23□□□□□ -0.45
CLCNKA-207ENST00000495784 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms