RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 VPS25Q9BRG1 176 aa0.92□□□□□ -2.26
COPS3-211ENST00000495640 TAS2R8Q9NYW2 309 aa0.92□□□□□ -2.26
COPS3-211ENST00000495640 NOP16Q9Y3C1 178 aaKnown RBP0.92□□□□□ -2.26
COPS3-211ENST00000495640 DLEC1Q9Y238 1755 aa0.92□□□□□ -2.26
COPS3-211ENST00000495640 AFDNP55196 1824 aaKnown RBP0.92□□□□□ -2.26
COPS3-211ENST00000495640 ASH1LQ9NR48 2969 aaKnown RBP0.91□□□□□ -2.26
COPS3-211ENST00000495640 ESPL1Q14674 2120 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 TRAV2A0A0B4J234 112 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 MIC13Q5XKP0 118 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 ATOH7Q8N100 152 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 Q8N6K4 173 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 DYNLRB2Q8TF09 96 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 PPDPFLQ8WWR9 84 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 TSC22D3Q99576 134 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 MRPL35Q9NZE8 188 aaKnown RBP0.91□□□□□ -2.26
COPS3-211ENST00000495640 PTPRMP28827 1452 aa0.91□□□□□ -2.26
COPS3-211ENST00000495640 LOC101927531A0A1B0GV80 90 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 J3QLW9 94 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 PRB4P10163 310 aaPredicted RBP0.9□□□□□ -2.27
COPS3-211ENST00000495640 POLR2JP52435 117 aaKnown RBP0.9□□□□□ -2.27
COPS3-211ENST00000495640 LINC00575Q6W349 94 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 Q6ZUT4 128 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 LINC00470Q9BZP3 86 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 SAR1AQ9NR31 198 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 GRIN2AQ12879 1464 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 FBN3Q75N90 2809 aa0.9□□□□□ -2.27
COPS3-211ENST00000495640 MYOM3Q5VTT5 1437 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 ABCA1O95477 2261 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 MUC22E2RYF6 1773 aaPredicted RBP0.89□□□□□ -2.27
COPS3-211ENST00000495640 TRAV17A0A0B4J275 112 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 TRBV10-1A0A0K0K1A3 114 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 EFCAB10A6NFE3 127 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 HIGD1CA8MV81 97 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 TFF1P04155 84 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 SLC25A6P12236 298 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 SELENOWP63302 87 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 FXYD3Q14802 87 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 IQCJQ1A5X6 159 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 LINC01545Q5VT33 79 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 XAF1Q6GPH4 301 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 CCL19Q99731 98 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 ATG5Q9H1Y0 275 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 MED13LQ71F56 2210 aa0.89□□□□□ -2.27
COPS3-211ENST00000495640 TMEM2Q9UHN6 1383 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 PYYP10082 97 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 RRAS2P62070 204 aaPredicted RBP0.88□□□□□ -2.27
COPS3-211ENST00000495640 UNQ5815/PRO19632Q6UWF5 114 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 Q6ZQY7 126 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 VSTM2AQ8TAG5 236 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 DPH3Q96FX2 82 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 LINC00208Q96KT6 92 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 TMEM191AQ9H0A3 160 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 LAMB1P07942 1786 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 ZNF142P52746 1687 aaPredicted RBP0.88□□□□□ -2.27
COPS3-211ENST00000495640 RREB1Q92766 1687 aa0.88□□□□□ -2.27
COPS3-211ENST00000495640 CDK12Q9NYV4 1490 aaPredicted RBP0.87□□□□□ -2.27
COPS3-211ENST00000495640 PLXNA1Q9UIW2 1896 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 GNG7O60262 68 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 CCKP06307 115 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 SCIMPQ6UWF3 145 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 C5orf56Q8N8D9 126 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 ARL11Q969Q4 196 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 TENM1Q9UKZ4 2725 aa0.87□□□□□ -2.27
COPS3-211ENST00000495640 IBTKQ9P2D0 1353 aaPredicted RBP0.86□□□□□ -2.27
COPS3-211ENST00000495640 TRBV30A0A0K0K1B3 111 aa0.86□□□□□ -2.27
COPS3-211ENST00000495640 K7EIL1 84 aa0.86□□□□□ -2.27
COPS3-211ENST00000495640 EMX2Q04743 252 aa0.86□□□□□ -2.27
COPS3-211ENST00000495640 OR2T2Q6IF00 324 aa0.86□□□□□ -2.27
COPS3-211ENST00000495640 NDUFA12Q9UI09 145 aa0.86□□□□□ -2.27
COPS3-211ENST00000495640 TRAV12-2A0A075B6T6 113 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 CCDC179H3BU77 68 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 PIRTP0C851 137 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 GUCA1AP43080 201 aaPredicted RBP0.85□□□□□ -2.27
COPS3-211ENST00000495640 SPCS2Q15005 226 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 C10orf99Q6UWK7 81 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 Q86TA4 180 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 NDUFA11Q86Y39 141 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 C1orf54Q8WWF1 131 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 SPEF2Q9C093 1822 aa0.85□□□□□ -2.27
COPS3-211ENST00000495640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.27
COPS3-211ENST00000495640 CAV3P56539 151 aa0.84□□□□□ -2.27
COPS3-211ENST00000495640 RPL13AP3Q6NVV1 102 aa0.84□□□□□ -2.27
COPS3-211ENST00000495640 CCDC167Q9P0B6 97 aa0.84□□□□□ -2.27
COPS3-211ENST00000495640 MBD5Q9P267 1494 aa0.84□□□□□ -2.28
COPS3-211ENST00000495640 BLMP54132 1417 aaPredicted RBP0.83□□□□□ -2.28
COPS3-211ENST00000495640 NCOA3Q9Y6Q9 1424 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 LOC100130705A0A1B0GUX0 176 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 A0A1B0GV90 55 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 TSKUQ8WUA8 353 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 IFI27L1Q96BM0 104 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 PSMG3Q9BT73 122 aaPredicted RBP0.83□□□□□ -2.28
COPS3-211ENST00000495640 BCL9LQ86UU0 1499 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 ZNF462Q96JM2 2506 aa0.83□□□□□ -2.28
COPS3-211ENST00000495640 MAP2P11137 1827 aaKnown RBP0.82□□□□□ -2.28
COPS3-211ENST00000495640 PHIPQ8WWQ0 1821 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 NPC2P61916 151 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 ZNF56Q15929 161 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 SPANXN1Q5VSR9 72 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms