RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	ZNF80	P51504	273 aa	Predicted RBP	11.49	□□□□□ -0.57
TMEM53-209	ENST00000495630	CYB561D1	Q8N8Q1	229 aa		11.49	□□□□□ -0.57
TMEM53-209	ENST00000495630	GAGE12J	A6NER3	117 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	EIF3G	O75821	320 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	IGLV2-8	P01709	118 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	LINC00694	P0DN24	101 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	RNASE3	P12724	160 aa	Known RBP	11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	FGF8	P55075	233 aa	Predicted RBP	11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	GNG5	P63218	68 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	GAGE1	Q13065	139 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	GAGE4	Q13068	117 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	GAGE5	Q13069	117 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	GAGE13	Q4V321	117 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	PIK3CD-AS1	Q5SR53	167 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	MZT2B	Q6NZ67	158 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	SGK494	Q96LW2	274 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630	CCDC32	Q9BV29	185 aa		11.48	□□□□□ -0.57
TMEM53-209	ENST00000495630		A8MWV9	139 aa		11.47	□□□□□ -0.57
TMEM53-209	ENST00000495630	PARL	Q9H300	379 aa		11.47	□□□□□ -0.57
TMEM53-209	ENST00000495630	HSPB11	Q9Y547	144 aa		11.47	□□□□□ -0.57
TMEM53-209	ENST00000495630	URGCP-MRPS24	S4R325	110 aa		11.47	□□□□□ -0.57
TMEM53-209	ENST00000495630		K7EQM0	130 aa		11.46	□□□□□ -0.57
TMEM53-209	ENST00000495630	GCG	P01275	180 aa		11.46	□□□□□ -0.57
TMEM53-209	ENST00000495630	LINC00479	Q96M42	142 aa		11.46	□□□□□ -0.57
TMEM53-209	ENST00000495630	UBR4	Q5T4S7	5183 aa		11.45	□□□□□ -0.58
TMEM53-209	ENST00000495630	IGKV2D-24	A0A075B6R9	120 aa		11.45	□□□□□ -0.58
TMEM53-209	ENST00000495630	SMUG1	Q53HV7	270 aa		11.45	□□□□□ -0.58
TMEM53-209	ENST00000495630	TMEM75	Q8N9X5	138 aa		11.45	□□□□□ -0.58
TMEM53-209	ENST00000495630	OR2T35	Q8NGX2	323 aa		11.45	□□□□□ -0.58
TMEM53-209	ENST00000495630	PSG8	Q9UQ74	426 aa		11.45	□□□□□ -0.58
TMEM53-209	ENST00000495630	TCRA	P04437	139 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	NIT1	Q86X76	327 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	C5orf17	Q8NAS9	161 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	OR10G9	Q8NGN4	311 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	PPP1R1C	Q8WVI7	109 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	SAMD10	Q9BYL1	202 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630		Q9UF83	564 aa		11.44	□□□□□ -0.58
TMEM53-209	ENST00000495630	IGLV2-11	P01706	119 aa		11.43	□□□□□ -0.58
TMEM53-209	ENST00000495630	RPL12	P30050	165 aa	Known RBP	11.43	□□□□□ -0.58
TMEM53-209	ENST00000495630	ELOB	Q15370	118 aa		11.43	□□□□□ -0.58
TMEM53-209	ENST00000495630	ZFP69	Q49AA0	526 aa		11.43	□□□□□ -0.58
TMEM53-209	ENST00000495630	SMIM3	Q9BZL3	60 aa		11.43	□□□□□ -0.58
TMEM53-209	ENST00000495630	KLK12	Q9UKR0	248 aa		11.43	□□□□□ -0.58
TMEM53-209	ENST00000495630	S100A4	P26447	101 aa	Known RBP	11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	FLI1	Q01543	452 aa	Predicted RBP	11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	C14orf177	Q52M58	125 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	SAPCD1	Q5SSQ6	148 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	UFSP1	Q6NVU6	142 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	ATRAID	Q6UW56	229 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	C14orf178	Q8N769	122 aa	Predicted RBP	11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	OR10G7	Q8NGN6	311 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	DNAJC30	Q96LL9	226 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	CHCHD7	Q9BUK0	85 aa		11.42	□□□□□ -0.58
TMEM53-209	ENST00000495630	HMGB3	O15347	200 aa	Known RBP	11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	MPC2	O95563	127 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	PET100	P0DJ07	73 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	H2BFS	P57053	126 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	RAB2A	P61019	212 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	PRNT	Q86SH4	94 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	SUN5	Q8TC36	379 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	UBE2W	Q96B02	151 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	WFDC1	Q9HC57	220 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630	EPDR1	Q9UM22	224 aa		11.41	□□□□□ -0.58
TMEM53-209	ENST00000495630		A0A087WX48	190 aa		11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630	IGKV3D-20	A0A0C4DH25	116 aa		11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630	ARL14EPL	P0DKL9	152 aa		11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630	RPL37A	P61513	92 aa	Known RBP	11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630		Q0VG73	95 aa		11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630	JPT2	Q9H910	190 aa		11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630	FAT3	Q8TDW7	4589 aa		11.4	□□□□□ -0.58
TMEM53-209	ENST00000495630	FABP5P3	A8MUU1	101 aa		11.39	□□□□□ -0.59
TMEM53-209	ENST00000495630	RHOD	O00212	210 aa		11.39	□□□□□ -0.59
TMEM53-209	ENST00000495630	STAG3L2	P0CL84	134 aa		11.39	□□□□□ -0.59
TMEM53-209	ENST00000495630	STAG3L3	P0CL85	134 aa		11.39	□□□□□ -0.59
TMEM53-209	ENST00000495630	SUMO1	P63165	101 aa	Known RBP	11.39	□□□□□ -0.59
TMEM53-209	ENST00000495630	IL36B	Q9NZH7	164 aa		11.39	□□□□□ -0.59
TMEM53-209	ENST00000495630	ASIP	P42127	132 aa		11.38	□□□□□ -0.59
TMEM53-209	ENST00000495630	DMRTA1	Q5VZB9	504 aa		11.38	□□□□□ -0.59
TMEM53-209	ENST00000495630	KCNIP4	Q6PIL6	250 aa		11.38	□□□□□ -0.59
TMEM53-209	ENST00000495630	ENKUR	Q8TC29	256 aa		11.38	□□□□□ -0.59
TMEM53-209	ENST00000495630	GCHFR	P30047	84 aa		11.37	□□□□□ -0.59
TMEM53-209	ENST00000495630	CDC34	P49427	236 aa	Predicted RBP	11.37	□□□□□ -0.59
TMEM53-209	ENST00000495630	OR2G3	Q8NGZ4	309 aa		11.37	□□□□□ -0.59
TMEM53-209	ENST00000495630	RAB24	Q969Q5	203 aa		11.37	□□□□□ -0.59
TMEM53-209	ENST00000495630	DAZAP1	Q96EP5	407 aa	Known RBP	11.37	□□□□□ -0.59
TMEM53-209	ENST00000495630	INMT-MINDY4	F8WBC2	141 aa		11.36	□□□□□ -0.59
TMEM53-209	ENST00000495630	LINC00299	Q6ZSB3	139 aa		11.36	□□□□□ -0.59
TMEM53-209	ENST00000495630	C1orf43	Q9BWL3	253 aa		11.36	□□□□□ -0.59
TMEM53-209	ENST00000495630	NDUFA13	Q9P0J0	144 aa		11.36	□□□□□ -0.59
TMEM53-209	ENST00000495630	DNLZ	Q5SXM8	178 aa		11.35	□□□□□ -0.59
TMEM53-209	ENST00000495630	DGAT2L7P	Q6IED9	249 aa		11.35	□□□□□ -0.59
TMEM53-209	ENST00000495630	TMEM167B	Q9NRX6	74 aa		11.35	□□□□□ -0.59
TMEM53-209	ENST00000495630	HNRNPA3	P51991	378 aa	Known RBP	11.34	□□□□□ -0.59
TMEM53-209	ENST00000495630	TRBV10-1	A0A0K0K1A3	114 aa		11.33	□□□□□ -0.6
TMEM53-209	ENST00000495630		B4DEV8	164 aa		11.33	□□□□□ -0.6
TMEM53-209	ENST00000495630	TMEM262	E9PQX1	116 aa		11.33	□□□□□ -0.6
TMEM53-209	ENST00000495630	CXorf1	O96002	111 aa		11.33	□□□□□ -0.6
TMEM53-209	ENST00000495630	ARMS2	P0C7Q2	107 aa		11.33	□□□□□ -0.6
TMEM53-209	ENST00000495630	ENHO	Q6UWT2	76 aa		11.33	□□□□□ -0.6

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