RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CRYBA4P53673 196 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 VKORC1Q9BQB6 163 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
SDF4-207ENST00000494748 SFTA2Q6UW10 78 aa11.62□□□□□ -0.55
SDF4-207ENST00000494748 Q6ZUT4 128 aa11.62□□□□□ -0.55
SDF4-207ENST00000494748 POM121L12Q8N7R1 296 aa11.62□□□□□ -0.55
SDF4-207ENST00000494748 A0A0J9YY99 117 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 G3V318 75 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 NDUFA11Q86Y39 141 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 C14orf178Q8N769 122 aaPredicted RBP11.61□□□□□ -0.55
SDF4-207ENST00000494748 MAP1AP78559 2803 aaPredicted RBP11.61□□□□□ -0.55
SDF4-207ENST00000494748 ZFP36P26651 326 aaKnown RBP11.61□□□□□ -0.55
SDF4-207ENST00000494748 PSMB2P49721 201 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 MINOS1Q5TGZ0 78 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 C1orf122Q6ZSJ8 110 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 MINOS1-NBL1R4GNA1 71 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 C11orf86A6NJI1 115 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 M0R381 172 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 TSPEAR-AS2P59090 65 aa11.61□□□□□ -0.55
SDF4-207ENST00000494748 CEP295Q9C0D2 2601 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
SDF4-207ENST00000494748 TCL1BO95988 128 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 Q6ZS46 218 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 AMELXQ99217 191 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
SDF4-207ENST00000494748 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
SDF4-207ENST00000494748 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 LENEPQ9Y5L5 61 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 LINC00315P59091 139 aa11.6□□□□□ -0.55
SDF4-207ENST00000494748 TLN1Q9Y490 2541 aaKnown RBP11.59□□□□□ -0.55
SDF4-207ENST00000494748 TMEM238LA0A1B0GVL6 79 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 A6NJY4 79 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 SPINK8P0C7L1 97 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 METTL26Q96S19 204 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 SIRPDQ9H106 197 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 SOCS3O14543 225 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 DEFB1P60022 68 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 IGHV3-30P01768 117 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 CFC1P0CG37 223 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 IGHV3-30-5P0DP03 117 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
SDF4-207ENST00000494748 C11orf71Q6IPW1 123 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 TEN1Q86WV5 123 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 KIF25-AS1Q9Y6Z4 181 aa11.59□□□□□ -0.55
SDF4-207ENST00000494748 EIF4EBP3O60516 100 aaPredicted RBP11.58□□□□□ -0.56
SDF4-207ENST00000494748 LOC107984156A0A0G2JMH3 177 aa11.58□□□□□ -0.56
SDF4-207ENST00000494748 J3KRW8 73 aa11.58□□□□□ -0.56
SDF4-207ENST00000494748 ARL17AQ8IVW1 177 aa11.58□□□□□ -0.56
SDF4-207ENST00000494748 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 PPDPFLQ8WWR9 84 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 SCGB2A2Q13296 93 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 APRG1Q8IVJ8 170 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 C16orf92Q96LL3 132 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 CELSR1Q9NYQ6 3014 aa11.57□□□□□ -0.56
SDF4-207ENST00000494748 ATRXP46100 2492 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 TRBV7-1A0A0A6YYK4 115 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 NXPH4O95158 308 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 MED14OSP0DP75 135 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
SDF4-207ENST00000494748 CDSNQ15517 529 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 EEF1AKMT3Q96AZ1 226 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 EMP1P54849 157 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 C9orf139Q6ZV77 190 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 C19orf54Q5BKX5 351 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 TIMD4Q96H15 378 aa11.56□□□□□ -0.56
SDF4-207ENST00000494748 GNRH2O43555 120 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 MGPP08493 103 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 ASIPP42127 132 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 SLC25A29Q8N8R3 303 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 TRAV21A0A0B4J279 112 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 FBXL19-AS1Q494R0 122 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 ZNRF2Q8NHG8 242 aa11.55□□□□□ -0.56
SDF4-207ENST00000494748 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
SDF4-207ENST00000494748 KIR2DL4Q99706 377 aa11.54□□□□□ -0.56
SDF4-207ENST00000494748 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
SDF4-207ENST00000494748 VPS13CQ709C8 3753 aa11.54□□□□□ -0.56
SDF4-207ENST00000494748 SORL1Q92673 2214 aa11.54□□□□□ -0.56
SDF4-207ENST00000494748 IGHV1-69DA0A0B4J2H0 117 aa11.54□□□□□ -0.56
SDF4-207ENST00000494748 POLR2KP53803 58 aaKnown RBP11.54□□□□□ -0.56
SDF4-207ENST00000494748 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
SDF4-207ENST00000494748 IGHV4OR15-8A0A075B7B6 117 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 A0A087WW49 117 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 FAM90A27PA6NNH2 459 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 GATA3P23771 443 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 UNQ9165/PRO28630Q6UXU0 137 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 C10orf126Q8N4M7 172 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 ANKRD29Q8N6D5 301 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
SDF4-207ENST00000494748 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
SDF4-207ENST00000494748 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.56
SDF4-207ENST00000494748 TRBV20-1A0A075B6N2 111 aa11.52□□□□□ -0.57
SDF4-207ENST00000494748 PMVKQ15126 192 aa11.52□□□□□ -0.57
SDF4-207ENST00000494748 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
SDF4-207ENST00000494748 F6UB75 175 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms