RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 MBD2Q9UBB5 411 aa4.45□□□□□ -1.7
SEC23B-208ENST00000494645 LENEPQ9Y5L5 61 aa4.45□□□□□ -1.7
SEC23B-208ENST00000494645 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
SEC23B-208ENST00000494645 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 HMGB3O15347 200 aaKnown RBP4.44□□□□□ -1.7
SEC23B-208ENST00000494645 RS1O15537 224 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 C1QBP02746 253 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 GAGE1Q13065 139 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 GAGE4Q13068 117 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 GAGE5Q13069 117 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 RHOHQ15669 191 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 GAGE13Q4V321 117 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 ANKRD39Q53RE8 183 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 SCXQ7RTU7 201 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 DAZ4Q86SG3 579 aaKnown RBP4.44□□□□□ -1.7
SEC23B-208ENST00000494645 TMEM75Q8N9X5 138 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 SCGB1C1Q8TD33 95 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 DNAJC30Q96LL9 226 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 DAZ3Q9NR90 486 aaKnown RBP4.44□□□□□ -1.7
SEC23B-208ENST00000494645 C11orf21Q9P2W6 132 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
SEC23B-208ENST00000494645 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 RBFOX3A6NFN3 312 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 PGPEP1LA6NFU8 196 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 ZNF80P51504 273 aaPredicted RBP4.43□□□□□ -1.7
SEC23B-208ENST00000494645 TAS2R45P59539 299 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 ZNF506Q5JVG8 444 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 FAM74A1Q5RGS3 127 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 Q6ZSA8 131 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 SYT8Q8NBV8 401 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 OR2T35Q8NGX2 323 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 KCNS1Q96KK3 526 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 Q9UF83 564 aa4.43□□□□□ -1.7
SEC23B-208ENST00000494645 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 TRBV6-4A0A1B0GX49 114 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 A0A1W2PPV4 95 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 GGTLC3B5MD39 225 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 GCGP01275 180 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 IGLV2-8P01709 118 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 RAB2AP61019 212 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 LAGE3Q14657 143 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 LGALSLQ3ZCW2 172 aaPredicted RBP4.42□□□□□ -1.7
SEC23B-208ENST00000494645 SERTAD4-AS1Q5TG53 156 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 MZT2BQ6NZ67 158 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 C9orf85Q96MD7 179 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 NDFIP1Q9BT67 221 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 SAMD10Q9BYL1 202 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 WFDC1Q9HC57 220 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 PLA2G2DQ9UNK4 145 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 HSPB11Q9Y547 144 aa4.42□□□□□ -1.7
SEC23B-208ENST00000494645 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 IGKV2D-24A0A075B6R9 120 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 TAAR5O14804 337 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 MGST1P10620 155 aaKnown RBP4.41□□□□□ -1.7
SEC23B-208ENST00000494645 ACOT6Q3I5F7 207 aaPredicted RBP4.41□□□□□ -1.7
SEC23B-208ENST00000494645 PRNTQ86SH4 94 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
SEC23B-208ENST00000494645 ENKURQ8TC29 256 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 PPP1R1CQ8WVI7 109 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 CHAC1Q9BUX1 264 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 JPT2Q9H910 190 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 PSG8Q9UQ74 426 aa4.41□□□□□ -1.7
SEC23B-208ENST00000494645 TCRAP04437 139 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 ARL14EPLP0DKL9 152 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 RNASE3P12724 160 aaKnown RBP4.4□□□□□ -1.71
SEC23B-208ENST00000494645 S100A4P26447 101 aaKnown RBP4.4□□□□□ -1.71
SEC23B-208ENST00000494645 RPL12P30050 165 aaKnown RBP4.4□□□□□ -1.71
SEC23B-208ENST00000494645 H2BFSP57053 126 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
SEC23B-208ENST00000494645 CYCSP99999 105 aaKnown RBP4.4□□□□□ -1.71
SEC23B-208ENST00000494645 SMUG1Q53HV7 270 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 TOR2AQ5JU69 321 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 PQLC2Q6ZP29 291 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 Q8N976 141 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 OR10G9Q8NGN4 311 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 OR10G7Q8NGN6 311 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 CCDC32Q9BV29 185 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 PARLQ9H300 379 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 KLK12Q9UKR0 248 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 URGCP-MRPS24S4R325 110 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 PKHD1L1Q86WI1 4243 aa4.4□□□□□ -1.71
SEC23B-208ENST00000494645 TRAV34A0A0B4J273 112 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 K7EQM0 130 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 SSNA1O43805 119 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 CIDEAO60543 219 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 MPC2O95563 127 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 OXTP01178 125 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 IGLV2-11P01706 119 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 LINC00694P0DN24 101 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 GCHFRP30047 84 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 FLI1Q01543 452 aaPredicted RBP4.39□□□□□ -1.71
SEC23B-208ENST00000494645 ASAH1Q13510 395 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 ZFP69Q49AA0 526 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 CYB561D1Q8N8Q1 229 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 UBE2WQ96B02 151 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 RMI2Q96E14 147 aa4.39□□□□□ -1.71
SEC23B-208ENST00000494645 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms