RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TCL1AP56279 114 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 HIST1H1AQ02539 215 aaPredicted RBP9.43□□□□□ -0.9
ERCC3-209ENST00000494464 RRN3P1Q2M238 152 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 ATP5L2Q7Z4Y8 100 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 NDFIP1Q9BT67 221 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 PPP1R14DQ9NXH3 145 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 TRAPPC1Q9Y5R8 145 aa9.43□□□□□ -0.9
ERCC3-209ENST00000494464 IGHV4-4A0A075B6R2 117 aa9.42□□□□□ -0.9
ERCC3-209ENST00000494464 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
ERCC3-209ENST00000494464 FABP9Q0Z7S8 132 aa9.42□□□□□ -0.9
ERCC3-209ENST00000494464 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
ERCC3-209ENST00000494464 NUP35Q8NFH5 326 aa9.42□□□□□ -0.9
ERCC3-209ENST00000494464 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
ERCC3-209ENST00000494464 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
ERCC3-209ENST00000494464 HIGD1CA8MV81 97 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 HOXA5P20719 270 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 Q6AWC8 147 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 C8orf49Q96NF6 230 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 VGLL1Q99990 258 aa9.41□□□□□ -0.9
ERCC3-209ENST00000494464 A0A1B0GXF2 115 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 TSPOP30536 169 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 CRIP1P50238 77 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 EMP1P54849 157 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
ERCC3-209ENST00000494464 NDUFA6P56556 154 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 SMUG1Q53HV7 270 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 TMEM136Q6ZRR5 245 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
ERCC3-209ENST00000494464 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
ERCC3-209ENST00000494464 SH2D1AO60880 128 aa9.39□□□□□ -0.91
ERCC3-209ENST00000494464 CDKN1BP46527 198 aa9.39□□□□□ -0.91
ERCC3-209ENST00000494464 ZNF138P52744 262 aa9.39□□□□□ -0.91
ERCC3-209ENST00000494464 TMEM78Q5T7P6 136 aa9.39□□□□□ -0.91
ERCC3-209ENST00000494464 Q8TAT8 98 aa9.39□□□□□ -0.91
ERCC3-209ENST00000494464 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
ERCC3-209ENST00000494464 TRAV12-2A0A075B6T6 113 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 XKRY2A2RUG3 117 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 S100A8P05109 93 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
ERCC3-209ENST00000494464 MRPL54Q6P161 138 aaKnown RBP9.38□□□□□ -0.91
ERCC3-209ENST00000494464 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 BIRC6Q9NR09 4857 aa9.38□□□□□ -0.91
ERCC3-209ENST00000494464 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 HBBP68871 147 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 ERCC8Q13216 396 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 AGPAT4-IT1Q9H0P7 198 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 FRAS1Q86XX4 4008 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 DNAH10Q8IVF4 4471 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 LYRM9A8MSI8 78 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 SPINK4O60575 86 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 PRB4P10163 310 aaPredicted RBP9.37□□□□□ -0.91
ERCC3-209ENST00000494464 GATD1Q8NB37 220 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
ERCC3-209ENST00000494464 A0A1B0GW15 77 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 ZNF80P51504 273 aaPredicted RBP9.36□□□□□ -0.91
ERCC3-209ENST00000494464 DAD1P61803 113 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 LINC01587Q99440 93 aa9.36□□□□□ -0.91
ERCC3-209ENST00000494464 APCSP02743 223 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 P0DMU3 169 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 FAM231AP0DMU4 169 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 FAM231CP0DMU5 169 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 CTRLP40313 264 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 AKR1D1P51857 326 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 TMEM263Q8WUH6 116 aaKnown RBP9.35□□□□□ -0.91
ERCC3-209ENST00000494464 PGLYRP4Q96LB8 373 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
ERCC3-209ENST00000494464 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 IFITM10A6NMD0 228 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 PRM2P04554 102 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 GZMBP10144 247 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 AZU1P20160 251 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 LEPP41159 167 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 RAB4BP61018 213 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 Q0VG73 95 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 RIGQ13278 110 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 KIR3DS1Q14943 382 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 GFI1BQ5VTD9 330 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 ZNF493Q6ZR52 646 aa9.34□□□□□ -0.91
ERCC3-209ENST00000494464 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
ERCC3-209ENST00000494464 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
ERCC3-209ENST00000494464 SMIM6P0DI80 62 aa9.33□□□□□ -0.92
ERCC3-209ENST00000494464 CRISP2P16562 243 aa9.33□□□□□ -0.92
ERCC3-209ENST00000494464 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
ERCC3-209ENST00000494464 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms