RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 YPEL2Q96QA6 119 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 NAA38Q9BRA0 125 aaKnown RBP2.37□□□□□ -2.03
SMC2-205ENST00000493955 ACER3Q9NUN7 267 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 CUBNO60494 3623 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 TRAV1-1A0A0B4J248 108 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 APOC4-APOC2K7ER74 178 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 APOC2P02655 101 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 MGST1P10620 155 aaKnown RBP2.36□□□□□ -2.03
SMC2-205ENST00000493955 CMPK1P30085 196 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 CRYBA4P53673 196 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 TCTAP57738 103 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 DEFB113Q30KQ7 82 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 OR2T10Q8NGZ9 312 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 RMND5BQ96G75 393 aaPredicted RBP2.36□□□□□ -2.03
SMC2-205ENST00000493955 PRADC1Q9BSG0 188 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 PBDC1Q9BVG4 233 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 NSD1Q96L73 2696 aaPredicted RBP2.36□□□□□ -2.03
SMC2-205ENST00000493955 ALPK2Q86TB3 2170 aa2.36□□□□□ -2.03
SMC2-205ENST00000493955 TRGV10A0A0A0MS01 117 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 DUXBA0A1W2PPF3 345 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 ASAH2BP0C7U1 165 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 SKA2Q8WVK7 121 aaPredicted RBP2.35□□□□□ -2.03
SMC2-205ENST00000493955 TMEM70Q9BUB7 260 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 MRPL32Q9BYC8 188 aaKnown RBP2.35□□□□□ -2.03
SMC2-205ENST00000493955 PROK2Q9HC23 129 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 OR5AC2Q9NZP5 309 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 CSPG4Q6UVK1 2322 aa2.35□□□□□ -2.03
SMC2-205ENST00000493955 TRAV14DV4A0A0A6YYC5 116 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 M0R378 163 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 UBL3O95164 117 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 RPS3P23396 243 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMC2-205ENST00000493955 PLGLB1Q02325 96 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 C3orf33Q6P1S2 294 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 PLPP5Q8NEB5 264 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 CANT1Q8WVQ1 401 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 PBOV1Q9GZY1 135 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 TMEM126AQ9H061 195 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 BCL2L10Q9HD36 194 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 BIN3Q9NQY0 253 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 V9GYQ6 96 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 ANK3Q12955 4377 aaKnown RBP2.34□□□□□ -2.03
SMC2-205ENST00000493955 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
SMC2-205ENST00000493955 RIIAD1A6NNX1 92 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 GGCTO75223 188 aaKnown RBP2.34□□□□□ -2.04
SMC2-205ENST00000493955 ESRGQ1W209 222 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 RNASE10Q5GAN6 216 aaKnown RBP2.34□□□□□ -2.04
SMC2-205ENST00000493955 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 GRINAQ7Z429 371 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 STX19Q8N4C7 294 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 LINC00311Q8N616 119 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 C3orf56Q8N813 242 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 OR10J5Q8NHC4 309 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 C1orf54Q8WWF1 131 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 MALSU1Q96EH3 234 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 PCTPQ9UKL6 214 aa2.34□□□□□ -2.04
SMC2-205ENST00000493955 NIPBLQ6KC79 2804 aaeCLIP2.33□□□□□ -2.04
SMC2-205ENST00000493955 TRAV3A0A0B4J244 114 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 DEFB108AA8MXU0 73 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 FABP1P07148 127 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 MPC1LP0DKB6 136 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 RPL22P35268 128 aaKnown RBP2.33□□□□□ -2.04
SMC2-205ENST00000493955 SSR2P43308 183 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 UBE2BP63146 152 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 SNCBQ16143 134 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 PDZD9Q8IXQ8 264 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 SLC30A7Q8NEW0 376 aa2.33□□□□□ -2.04
SMC2-205ENST00000493955 ADAT1Q9BUB4 502 aaKnown RBP2.33□□□□□ -2.04
SMC2-205ENST00000493955 USF3Q68DE3 2245 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 ZANQ9Y493 2812 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 ARFGEF3Q5TH69 2177 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 NDUFB3O43676 98 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 MRPS14O60783 128 aaKnown RBP2.32□□□□□ -2.04
SMC2-205ENST00000493955 APOA2P02652 100 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 OGNP20774 298 aaKnown RBP2.32□□□□□ -2.04
SMC2-205ENST00000493955 NFYBP25208 207 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 SERPINB1P30740 379 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 GPER1Q99527 375 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 CCL19Q99731 98 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 CHCHD2Q9Y6H1 151 aaPredicted RBP2.32□□□□□ -2.04
SMC2-205ENST00000493955 ABCA1O95477 2261 aa2.32□□□□□ -2.04
SMC2-205ENST00000493955 SONP18583 2426 aaKnown RBP2.31□□□□□ -2.04
SMC2-205ENST00000493955 JMJD1CQ15652 2540 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 TLN2Q9Y4G6 2542 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 A0A096LNT2 108 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 C2orf70A6NJV1 201 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 PPP5D1E7EU14 171 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 C10orf55Q5SWW7 151 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 SOSTDC1Q6X4U4 206 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 TEX37Q96LM6 180 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 OR2J1Q9GZK6 312 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 PCBD2Q9H0N5 130 aa2.31□□□□□ -2.04
SMC2-205ENST00000493955 TMEM256-PLSCR3K7ERE1 68 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 PIAS1O75925 651 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 IDO1P14902 403 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 CRYGSP22914 178 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 BRS3P32247 399 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 RHOGP84095 191 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 PDE6HQ13956 83 aa2.3□□□□□ -2.04
SMC2-205ENST00000493955 Q8N2B8 174 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms