RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MUC4Q99102 2169 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 MUC21A0A0G2JKD1 596 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 MUC21A0A140T8X8 626 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 FAM74A3Q4VXF1 159 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 LY96Q9Y6Y9 160 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-208ENST00000493815 HOXA5P20719 270 aa12.6□□□□□ -0.39
PDLIM7-208ENST00000493815 SSTP61278 116 aa12.6□□□□□ -0.39
PDLIM7-208ENST00000493815 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
PDLIM7-208ENST00000493815 ERVFC1-1P60608 527 aa12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 ADIRFQ15847 76 aa12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 TPPP3Q9BW30 176 aa12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 KLK5Q9Y337 293 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 PLECQ15149 4684 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-208ENST00000493815 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
PDLIM7-208ENST00000493815 RPP21Q9H633 154 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-208ENST00000493815 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
PDLIM7-208ENST00000493815 PHLDA3Q9Y5J5 127 aa12.58□□□□□ -0.4
PDLIM7-208ENST00000493815 M0R381 172 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 OR10AG1Q8NH19 301 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 JPT2Q9H910 190 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 CXCL1P09341 107 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
PDLIM7-208ENST00000493815 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
PDLIM7-208ENST00000493815 LINC00862A6NCI5 91 aa12.56□□□□□ -0.4
PDLIM7-208ENST00000493815 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-208ENST00000493815 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
PDLIM7-208ENST00000493815 ISOC2Q96AB3 205 aa12.56□□□□□ -0.4
PDLIM7-208ENST00000493815 A0A0J9YY99 117 aa12.55□□□□□ -0.4
PDLIM7-208ENST00000493815 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-208ENST00000493815 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
PDLIM7-208ENST00000493815 TRAV26-1A0A087WT03 109 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 IGLC6P0CF74 106 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 UQCC3Q6UW78 93 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 PTH2Q96A98 100 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 SSBP4Q9BWG4 385 aaPredicted RBP12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 LYSTQ99698 3801 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 SNAI2O43623 268 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 OR5AL1P0C617 328 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 FHL2Q14192 279 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 SFRP2Q96HF1 295 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 SAMD10Q9BYL1 202 aa12.54□□□□□ -0.4
PDLIM7-208ENST00000493815 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 ADCYAP1P18509 176 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 LYZL1Q6UWQ5 148 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
PDLIM7-208ENST00000493815 TMEM218A2RU14 115 aa12.52□□□□□ -0.4
PDLIM7-208ENST00000493815 RS1O15537 224 aa12.52□□□□□ -0.4
PDLIM7-208ENST00000493815 NDUFAF3Q9BU61 184 aa12.52□□□□□ -0.4
PDLIM7-208ENST00000493815 APLNQ9ULZ1 77 aa12.52□□□□□ -0.4
PDLIM7-208ENST00000493815 A0A087WWL8 130 aa12.51□□□□□ -0.41
PDLIM7-208ENST00000493815 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
PDLIM7-208ENST00000493815 V9GYV3 84 aa12.51□□□□□ -0.41
PDLIM7-208ENST00000493815 VSIG2Q96IQ7 327 aa12.51□□□□□ -0.41
PDLIM7-208ENST00000493815 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
PDLIM7-208ENST00000493815 HHLA3Q9XRX5 114 aa12.51□□□□□ -0.41
PDLIM7-208ENST00000493815 A8MWL6 223 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 A8MWV9 139 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 F8W036 122 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 NXPH4O95158 308 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 NUDT3O95989 172 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
PDLIM7-208ENST00000493815 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
PDLIM7-208ENST00000493815 FAM210BQ96KR6 192 aa12.49□□□□□ -0.41
PDLIM7-208ENST00000493815 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
PDLIM7-208ENST00000493815 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
PDLIM7-208ENST00000493815 PAX4O43316 350 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 CTRLP40313 264 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 CRYBA4P53673 196 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 CT83Q5H943 113 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 Q6ZSN1 163 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 F2Z2F3 143 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 CRYGDP07320 174 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 TSKUQ8WUA8 353 aa12.48□□□□□ -0.41
PDLIM7-208ENST00000493815 KMT2CQ8NEZ4 4911 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-208ENST00000493815 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-208ENST00000493815 NTF3P20783 257 aa12.47□□□□□ -0.41
PDLIM7-208ENST00000493815 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-208ENST00000493815 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.41
PDLIM7-208ENST00000493815 HIGD1CA8MV81 97 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms