RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SSTP61278 116 aa9.62□□□□□ -0.87
MSH6-208ENST00000493177 Q8NAQ8 132 aa9.62□□□□□ -0.87
MSH6-208ENST00000493177 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
MSH6-208ENST00000493177 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
MSH6-208ENST00000493177 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
MSH6-208ENST00000493177 IL36BQ9NZH7 164 aa9.62□□□□□ -0.87
MSH6-208ENST00000493177 PHLDA3Q9Y5J5 127 aa9.62□□□□□ -0.87
MSH6-208ENST00000493177 MUC21A0A0G2JKD1 596 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 MUC21A0A140T8X8 626 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 A0A1W2PPQ1 181 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
MSH6-208ENST00000493177 DNLZQ5SXM8 178 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
MSH6-208ENST00000493177 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 PGLYRP4Q96LB8 373 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 SPXQ9BT56 116 aa9.61□□□□□ -0.87
MSH6-208ENST00000493177 A0A087WWC5 75 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 MED14OSP0DP75 135 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 S100A1P23297 94 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 NANOS2P60321 138 aaKnown RBP9.6□□□□□ -0.87
MSH6-208ENST00000493177 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 PHLDA1Q8WV24 401 aaPredicted RBP9.6□□□□□ -0.87
MSH6-208ENST00000493177 GTSF1Q8WW33 167 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 GFRA4Q9GZZ7 299 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 NAT8BQ9UHF3 227 aa9.6□□□□□ -0.87
MSH6-208ENST00000493177 TRGV1A0A0A0MS02 117 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 PLAC8L1A1L4L8 177 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 M0R2P5 195 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 M0R381 172 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 LY6G6CO95867 125 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 SPANXN1Q5VSR9 72 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 ATRAIDQ6UW56 229 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
MSH6-208ENST00000493177 MRPL16Q9NX20 251 aaKnown RBP9.59□□□□□ -0.87
MSH6-208ENST00000493177 NBEAL2Q6ZNJ1 2754 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 F2Z2F3 143 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 SNAI2O43623 268 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 SPINK4O60575 86 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 S100PP25815 95 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 DAZ2Q13117 558 aaKnown RBP9.58□□□□□ -0.88
MSH6-208ENST00000493177 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 KCNIP4Q6PIL6 250 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 ZFP82Q8N141 532 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
MSH6-208ENST00000493177 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 LYRM9A8MSI8 78 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 GAGE7O76087 117 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 SPART-AS1P0CW21 52 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 CTRLP40313 264 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 FAM3BP58499 235 aaPredicted RBP9.57□□□□□ -0.88
MSH6-208ENST00000493177 CACNG7P62955 275 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 ZNF876PQ49A33 203 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 SSBP4Q9BWG4 385 aaPredicted RBP9.57□□□□□ -0.88
MSH6-208ENST00000493177 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
MSH6-208ENST00000493177 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 FOXA3P55318 350 aaPredicted RBP9.56□□□□□ -0.88
MSH6-208ENST00000493177 TWIST1Q15672 202 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 Q6ZTI0 123 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
MSH6-208ENST00000493177 TRGV2A0A075B6R0 118 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 TEX48A0A1B0GUV7 120 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 DAD1P61803 113 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 RIGQ13278 110 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 LGALS9BQ3B8N2 356 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 MRPL54Q6P161 138 aaKnown RBP9.55□□□□□ -0.88
MSH6-208ENST00000493177 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
MSH6-208ENST00000493177 RYR3Q15413 4870 aa9.54□□□□□ -0.88
MSH6-208ENST00000493177 NTF3P20783 257 aa9.54□□□□□ -0.88
MSH6-208ENST00000493177 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
MSH6-208ENST00000493177 PTH2Q96A98 100 aa9.54□□□□□ -0.88
MSH6-208ENST00000493177 DYNC2H1Q8NCM8 4307 aaKnown RBP9.54□□□□□ -0.88
MSH6-208ENST00000493177 IGHV3-53P01767 116 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 TMEM88Q6PEY1 159 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 RASL10AQ92737 203 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 BTF3L4Q96K17 158 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 SMCO4Q9NRQ5 59 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 MSRB1Q9NZV6 116 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 CSMD3Q7Z407 3707 aa9.53□□□□□ -0.88
MSH6-208ENST00000493177 IGHV4-4A0A075B6R2 117 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms