RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 VAMP8Q9BV40 100 aa6.96□□□□□ -1.29
CSTF1-206ENST00000493039 TRAV2A0A0B4J234 112 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 GGTLC3B5MD39 225 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 ISLRO14498 428 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 ZNF253O75346 499 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 ZNF688P0C7X2 276 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 MALP21145 153 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 ELOBQ15370 118 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 Q8N1Y9 231 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 TMEM167BQ9NRX6 74 aa6.96□□□□□ -1.3
CSTF1-206ENST00000493039 PRAC2D3DTV9 90 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 Q9H3A6 140 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 CXCL1P09341 107 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 PSMB3P49720 205 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-206ENST00000493039 RPL24P83731 157 aaKnown RBP6.95□□□□□ -1.3
CSTF1-206ENST00000493039 PSG9Q00887 426 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 ICAM4Q14773 271 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-206ENST00000493039 OR4B1Q8NGF8 309 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 MAP6D1Q9H9H5 199 aa6.95□□□□□ -1.3
CSTF1-206ENST00000493039 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 A0A087WWC5 75 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 PGPA6NDG6 321 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 NPIPB6E9PJ23 425 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 F6UB75 175 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 J3KT08 172 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 HBE1P02100 147 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 NHLRC4P0CG21 123 aaPredicted RBP6.94□□□□□ -1.3
CSTF1-206ENST00000493039 EVI2AP22794 236 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 FAM3BP58499 235 aaPredicted RBP6.94□□□□□ -1.3
CSTF1-206ENST00000493039 PSMG4Q5JS54 123 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 GDF5OSQ5U4N7 250 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 LYPD1Q8N2G4 141 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 SGK494Q96LW2 274 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 PRR25Q96S07 402 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 RARRES2Q99969 163 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 SLC50A1Q9BRV3 221 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 GNG13Q9P2W3 67 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 CYSLTR1Q9Y271 337 aa6.94□□□□□ -1.3
CSTF1-206ENST00000493039 A0A1B0GX51 115 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 ATP5G3P48201 142 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 DEFB131AP59861 70 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 TAL2Q16559 108 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 Q6ZN92 141 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 TMEM101Q96IK0 257 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 AGRNO00468 2067 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
CSTF1-206ENST00000493039 CT45A10P0DMU9 189 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 NTF3P20783 257 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 CTRLP40313 264 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 XGP55808 180 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 LINC00477Q96M19 166 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 OTORQ9NRC9 128 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 PAM16Q9Y3D7 125 aa6.93□□□□□ -1.3
CSTF1-206ENST00000493039 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
CSTF1-206ENST00000493039 RPL35AP18077 110 aaKnown RBP6.92□□□□□ -1.3
CSTF1-206ENST00000493039 SNRPD3P62318 126 aaKnown RBP6.92□□□□□ -1.3
CSTF1-206ENST00000493039 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
CSTF1-206ENST00000493039 GNG5P63218 68 aa6.92□□□□□ -1.3
CSTF1-206ENST00000493039 NUDT3O95989 172 aa6.92□□□□□ -1.3
CSTF1-206ENST00000493039 BCL2P10415 239 aa6.92□□□□□ -1.3
CSTF1-206ENST00000493039 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
CSTF1-206ENST00000493039 ARL2-SNX15V9GYD0 113 aa6.92□□□□□ -1.3
CSTF1-206ENST00000493039 LOC102723971A0A1B0GUV8 181 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 KNCNA6PVL3 124 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 C9JQL5 133 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 CCDC179H3BU77 68 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 FAM19A1Q7Z5A9 133 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 LINC00479Q96M42 142 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 AAMDCQ9H7C9 122 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 RETNQ9HD89 108 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 EPDR1Q9UM22 224 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 PRKDCP78527 4128 aaKnown RBP6.91□□□□□ -1.3
CSTF1-206ENST00000493039 A0A0J9YX75 114 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 TEX48A0A1B0GUV7 120 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 RBFOX3A6NFN3 312 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 DIRC3C9JPN6 131 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 C11orf94C9JXX5 98 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 TSPOP30536 169 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 EMP1P54849 157 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 SYT8Q8NBV8 401 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
CSTF1-206ENST00000493039 VGLL1Q99990 258 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 MANBALQ9NQG1 85 aa6.91□□□□□ -1.3
CSTF1-206ENST00000493039 IGKV2-40A0A087WW87 121 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-206ENST00000493039 RBMY1BA6NDE4 496 aaKnown RBP6.9□□□□□ -1.3
CSTF1-206ENST00000493039 RBMY1EA6NEQ0 496 aaKnown RBP6.9□□□□□ -1.3
CSTF1-206ENST00000493039 C9JAW5 83 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 H3BMM0 161 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 IGKV2D-40P01614 121 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-206ENST00000493039 IGLV2-11P01706 119 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 TCRAP04437 139 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 SLC25A5P05141 298 aaKnown RBP6.9□□□□□ -1.3
CSTF1-206ENST00000493039 RBMY1DP0C7P1 496 aaKnown RBP6.9□□□□□ -1.3
CSTF1-206ENST00000493039 ERCC8Q13216 396 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 ZNF506Q5JVG8 444 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms