RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 RAB9AP51151 201 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 SEC11AP67812 179 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 SRSF1Q07955 248 aaKnown RBP eCLIP11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ZNF493Q6ZR52 646 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 DPF1Q92782 380 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 RBX1P62877 108 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ODF1Q14990 250 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 KLHL30-AS1Q8NEE0 82 aa11.61□□□□□ -0.55
TNFRSF1B-203ENST00000492361 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
TNFRSF1B-203ENST00000492361 OOSP1A8MZH6 123 aa11.6□□□□□ -0.55
TNFRSF1B-203ENST00000492361 IGHV1-69P01742 117 aa11.6□□□□□ -0.55
TNFRSF1B-203ENST00000492361 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
TNFRSF1B-203ENST00000492361 ATP5LO75964 103 aa11.6□□□□□ -0.55
TNFRSF1B-203ENST00000492361 COTL1Q14019 142 aa11.6□□□□□ -0.55
TNFRSF1B-203ENST00000492361 KNCNA6PVL3 124 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 FBXL19-AS1Q494R0 122 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 CHTOPQ9Y3Y2 248 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 PRM2P04554 102 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 Q8N6K4 173 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
TNFRSF1B-203ENST00000492361 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 Q8N8P6 123 aa11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 CSMD2Q7Z408 3487 aa11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 PRB1P04280 392 aa11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SYNJ2BPP57105 145 aa11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ZNF418Q8TF45 676 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SUMO2P61956 95 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ITLN2Q8WWU7 325 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1B-203ENST00000492361 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 C2orf66Q6UXQ4 117 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 OR9G4Q8NGQ1 327 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 AJUBAQ96IF1 538 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 H3BMG7 143 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 IGHV4-59P01825 116 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 DEFB136Q30KP8 78 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ZNF815PA8K554 130 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ZFHX3Q15911 3703 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SCGB1C2P0DMR2 95 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 LINC01559Q495D7 138 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 FGF6P10767 208 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 C1orf122Q6ZSJ8 110 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 OR1N2Q8NGR9 330 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SMIM2Q9BVW6 85 aa11.56□□□□□ -0.56
TNFRSF1B-203ENST00000492361 TRBV6-1A0A0K0K1D8 114 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SLC25A16P16260 332 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ZNF479Q96JC4 524 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 DUSP14O95147 198 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SH2D6Q7Z4S9 175 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 BEX4Q9NWD9 120 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 FBN2P35556 2912 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 TEX15Q9BXT5 2789 aa11.55□□□□□ -0.56
TNFRSF1B-203ENST00000492361 MRPL16Q9NX20 251 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 A0A1W2PPM0 123 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 H3BRM9 83 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ETDBQ3ZM63 59 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 VPS13CQ709C8 3753 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 PAX2Q02962 417 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 NF1P21359 2839 aa11.54□□□□□ -0.56
TNFRSF1B-203ENST00000492361 IGHV7-4-1A0A0J9YVY3 117 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 NPC2P61916 151 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 SPOCK3Q9BQ16 436 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 ADARB2-AS1A8MUL3 147 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 AVPP01185 164 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 PRSS2P07478 247 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 U3KQK5 164 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
TNFRSF1B-203ENST00000492361 PRSS29PA6NIE9 313 aa11.52□□□□□ -0.56
TNFRSF1B-203ENST00000492361 EBI3Q14213 229 aa11.52□□□□□ -0.56
TNFRSF1B-203ENST00000492361 Q1RN00 199 aa11.52□□□□□ -0.57
TNFRSF1B-203ENST00000492361 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
TNFRSF1B-203ENST00000492361 PRADC1Q9BSG0 188 aa11.52□□□□□ -0.57
TNFRSF1B-203ENST00000492361 SMAGPQ0VAQ4 97 aa11.52□□□□□ -0.57
TNFRSF1B-203ENST00000492361 CHD6Q8TD26 2715 aa11.52□□□□□ -0.57
TNFRSF1B-203ENST00000492361 WFDC2Q14508 124 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ADAMTSL5Q6ZMM2 481 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 A0A0U1RRA0 63 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 A0A1B0GWB2 263 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 H7C1H1 209 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 K7EP34 96 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ID1P41134 155 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 PSMB2P49721 201 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 MDFICQ9P1T7 246 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 TEX48A0A1B0GUV7 120 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms