RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	EPM2A	B3EWF7	344 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	H2AFB1	P0C5Y9	115 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	DNAH10OS	P0CZ25	163 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	FUS	P35637	526 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	TDRG1	Q3Y452	100 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	HIST1H2BA	Q96A08	127 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	TCEAL7	Q9BRU2	100 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	PSG8	Q9UQ74	426 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	TRAV21	A0A0B4J279	112 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170		M0R2P5	195 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	PEX7	O00628	323 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	FLI1	Q01543	452 aa	Predicted RBP	10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	C10orf126	Q8N4M7	172 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	OR4C5	Q8NGB2	326 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	SGK494	Q96LW2	274 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	TREM1	Q9NP99	234 aa		10.4	□□□□□ -0.74
MRPL55-231	ENST00000492170	IFNA7	P01567	189 aa		10.39	□□□□□ -0.75
MRPL55-231	ENST00000492170	SH2D6	Q7Z4S9	175 aa		10.39	□□□□□ -0.75
MRPL55-231	ENST00000492170	NDFIP1	Q9BT67	221 aa		10.39	□□□□□ -0.75
MRPL55-231	ENST00000492170	IGHV3-16	A0A0C4DH30	117 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170		F6UZH7	168 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170	PAGE4	O60829	102 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170	CRYGD	P07320	174 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170	PPT1	P50897	306 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170	LINC00479	Q96M42	142 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170	SDF2L1	Q9HCN8	221 aa		10.38	□□□□□ -0.75
MRPL55-231	ENST00000492170	FAT1	Q14517	4588 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	TRBV6-1	A0A0K0K1D8	114 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170		A0A1B0GV50	99 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	GNRH2	O43555	120 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	TYMS	P04818	313 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	NKX2-5	P52952	324 aa	Predicted RBP	10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	SAPCD1	Q5SSQ6	148 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	CST9LP1	Q5W188	147 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	PRNT	Q86SH4	94 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170		Q86TA4	180 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	NHLRC2	Q8NBF2	726 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	KCNS1	Q96KK3	526 aa		10.37	□□□□□ -0.75
MRPL55-231	ENST00000492170	HERC1	Q15751	4861 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	TRAV34	A0A0B4J273	112 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	LOC100131303	A0A0U1RQF7	123 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	ZNF80	P51504	273 aa	Predicted RBP	10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	XG	P55808	180 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	TIRAP	P58753	221 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	CCL20	P78556	96 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	COX8C	Q7Z4L0	72 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	MANBAL	Q9NQG1	85 aa		10.36	□□□□□ -0.75
MRPL55-231	ENST00000492170	VPS13B	Q7Z7G8	4022 aa		10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	PFN1	P07737	140 aa	Known RBP	10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	GATA1	P15976	413 aa	Predicted RBP	10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	KRTAP10-1	P60331	282 aa		10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	SMUG1	Q53HV7	270 aa		10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	FRZB	Q92765	325 aa		10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	FMC1	Q96HJ9	113 aa		10.35	□□□□□ -0.75
MRPL55-231	ENST00000492170	IGHV3-38	A0A0C4DH36	116 aa		10.34	□□□□□ -0.75
MRPL55-231	ENST00000492170	TEX46	H3BTG2	121 aa		10.34	□□□□□ -0.75
MRPL55-231	ENST00000492170	PSCA	O43653	123 aa		10.34	□□□□□ -0.75
MRPL55-231	ENST00000492170	GCG	P01275	180 aa		10.34	□□□□□ -0.75
MRPL55-231	ENST00000492170	ZFP30	Q9Y2G7	519 aa		10.34	□□□□□ -0.75
MRPL55-231	ENST00000492170	BOLA1	Q9Y3E2	137 aa		10.34	□□□□□ -0.75
MRPL55-231	ENST00000492170	LTA	P01374	205 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	INAFM2	P0DMQ5	153 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	GCSH	P23434	173 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	AKR1C3	P42330	323 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	LINC01556	Q5JQF7	62 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170		Q5VSD8	79 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	PRADC1	Q9BSG0	188 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	GNG13	Q9P2W3	67 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	C11orf21	Q9P2W6	132 aa		10.33	□□□□□ -0.76
MRPL55-231	ENST00000492170	TRAV8-6	A0A0B4J262	113 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	SCO2	A0A1W2PP80	73 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	CIDEA	O60543	219 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	UBE2G1	P62253	170 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	RHOH	Q15669	191 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	ZNF876P	Q49A33	203 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	ALKAL2	Q6UX46	152 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	C11orf52	Q96A22	123 aa		10.32	□□□□□ -0.76
MRPL55-231	ENST00000492170	S100A9	P06702	114 aa	Known RBP	10.31	□□□□□ -0.76
MRPL55-231	ENST00000492170	OR10J3	Q5JRS4	329 aa		10.31	□□□□□ -0.76
MRPL55-231	ENST00000492170	SLC25A29	Q8N8R3	303 aa		10.31	□□□□□ -0.76
MRPL55-231	ENST00000492170	ZC2HC1A	Q96GY0	325 aa		10.31	□□□□□ -0.76
MRPL55-231	ENST00000492170	IGLV5-52	A0A0A0MRZ9	124 aa		10.3	□□□□□ -0.76
MRPL55-231	ENST00000492170	TRBV6-4	A0A1B0GX49	114 aa		10.3	□□□□□ -0.76
MRPL55-231	ENST00000492170	RS1	O15537	224 aa		10.3	□□□□□ -0.76
MRPL55-231	ENST00000492170	CFAP126	Q5VTH2	177 aa		10.3	□□□□□ -0.76
MRPL55-231	ENST00000492170	LYPD6B	Q8NI32	183 aa		10.3	□□□□□ -0.76
MRPL55-231	ENST00000492170	NTN5	Q8WTR8	489 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-231	ENST00000492170	IGHV3-73	A0A0B4J1V6	119 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	FABP5P3	A8MUU1	101 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	IBA57-AS1	B1ANH7	110 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	IFNA1	P01562	189 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	BCL2	P10415	239 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	CRIP1	P50238	77 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	BLOC1S1	P78537	153 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	MEF2B	Q02080	365 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	C9orf85	Q96MD7	179 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	MLST8	Q9BVC4	326 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170		Q9HAA7	133 aa		10.29	□□□□□ -0.76
MRPL55-231	ENST00000492170	IGKV3D-20	A0A0C4DH25	116 aa		10.28	□□□□□ -0.76
MRPL55-231	ENST00000492170	LRCOL1	A6NCL2	159 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms