RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TRAV9-2A0A087WT02 112 aa21.32■■□□□ 1
LDB1-204ENST00000490751 SEC11BP0C7V7 166 aa21.32■■□□□ 1
LDB1-204ENST00000490751 CST9LP1Q5W188 147 aa21.32■■□□□ 1
LDB1-204ENST00000490751 ZC2HC1AQ96GY0 325 aa21.32■■□□□ 1
LDB1-204ENST00000490751 PRADC1Q9BSG0 188 aa21.32■■□□□ 1
LDB1-204ENST00000490751 A0A0D9SG52 128 aa21.31■■□□□ 1
LDB1-204ENST00000490751 ASIPP42127 132 aa21.31■■□□□ 1
LDB1-204ENST00000490751 UBE2G1P62253 170 aa21.31■■□□□ 1
LDB1-204ENST00000490751 RHOHQ15669 191 aa21.31■■□□□ 1
LDB1-204ENST00000490751 FMC1Q96HJ9 113 aa21.31■■□□□ 1
LDB1-204ENST00000490751 ZNF471Q9BX82 626 aaPredicted RBP21.31■■□□□ 1
LDB1-204ENST00000490751 ZFP30Q9Y2G7 519 aa21.31■■□□□ 1
LDB1-204ENST00000490751 TRBV6-4A0A1B0GX49 114 aa21.3■■□□□ 1
LDB1-204ENST00000490751 BCL2L11O43521 198 aa21.3■■□□□ 1
LDB1-204ENST00000490751 DNAH10OSP0CZ25 163 aa21.3■■□□□ 1
LDB1-204ENST00000490751 CRIP1P50238 77 aa21.3■■□□□ 1
LDB1-204ENST00000490751 KRTAP10-2P60368 255 aa21.3■■□□□ 1
LDB1-204ENST00000490751 FAM213BQ8TBF2 198 aa21.3■■□□□ 1
LDB1-204ENST00000490751 TCEAL7Q9BRU2 100 aa21.3■■□□□ 1
LDB1-204ENST00000490751 KANTRA0A1W2PQU2 76 aa21.29■■□□□ 1
LDB1-204ENST00000490751 B4DEV8 164 aa21.29■■□□□ 1
LDB1-204ENST00000490751 EVI2AP22794 236 aa21.29■■□□□ 1
LDB1-204ENST00000490751 TIRAPP58753 221 aa21.29■■□□□ 1
LDB1-204ENST00000490751 COX8CQ7Z4L0 72 aa21.29■■□□□ 1
LDB1-204ENST00000490751 UMAD1C9J7I0 102 aa21.28■■□□□ 1
LDB1-204ENST00000490751 SFT2D1Q8WV19 159 aa21.28■■□□□ 1
LDB1-204ENST00000490751 HSPG2P98160 4391 aa21.27■■□□□ 1
LDB1-204ENST00000490751 K7EP13 123 aa21.27■■□□□ 1
LDB1-204ENST00000490751 M0R036 132 aa21.27■■□□□ 1
LDB1-204ENST00000490751 PAGE4O60829 102 aa21.27■■□□□ 1
LDB1-204ENST00000490751 SH2D1AO60880 128 aa21.27■■□□□ 1
LDB1-204ENST00000490751 NFE4Q86UQ8 179 aa21.27■■□□□ 1
LDB1-204ENST00000490751 MBD3L1Q8WWY6 194 aa21.27■■□□□ 1
LDB1-204ENST00000490751 PCLOQ9Y6V0 5065 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 TRBV6-1A0A0K0K1D8 114 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 A0A1B0GV50 99 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 H3BVH4 76 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 MGST1P10620 155 aaKnown RBP21.26■□□□□ 0.99
LDB1-204ENST00000490751 AKR1C3P42330 323 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 LGALSLQ3ZCW2 172 aaPredicted RBP21.26■□□□□ 0.99
LDB1-204ENST00000490751 PARLQ9H300 379 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 IL36BQ9NZH7 164 aa21.26■□□□□ 0.99
LDB1-204ENST00000490751 A8MWV9 139 aa21.25■□□□□ 0.99
LDB1-204ENST00000490751 KRBOX1C9JBD0 128 aa21.25■□□□□ 0.99
LDB1-204ENST00000490751 PIK3CD-AS1Q5SR53 167 aa21.25■□□□□ 0.99
LDB1-204ENST00000490751 FAM162BQ5T6X4 162 aa21.25■□□□□ 0.99
LDB1-204ENST00000490751 MSRB1Q9NZV6 116 aa21.25■□□□□ 0.99
LDB1-204ENST00000490751 DNAH5Q8TE73 4624 aa21.25■□□□□ 0.99
LDB1-204ENST00000490751 CDK2AP2O75956 126 aa21.24■□□□□ 0.99
LDB1-204ENST00000490751 LTAP01374 205 aa21.24■□□□□ 0.99
LDB1-204ENST00000490751 CRYGDP07320 174 aa21.23■□□□□ 0.99
LDB1-204ENST00000490751 ERVFC1-1P60608 527 aa21.23■□□□□ 0.99
LDB1-204ENST00000490751 DNLZQ5SXM8 178 aa21.23■□□□□ 0.99
LDB1-204ENST00000490751 ZFP2Q6ZN57 461 aa21.23■□□□□ 0.99
LDB1-204ENST00000490751 GRIFINA4D1Z8 144 aa21.22■□□□□ 0.99
LDB1-204ENST00000490751 EIF5AP63241 154 aaKnown RBP21.22■□□□□ 0.99
LDB1-204ENST00000490751 ZNF674Q2M3X9 581 aa21.22■□□□□ 0.99
LDB1-204ENST00000490751 JPT2Q9H910 190 aa21.22■□□□□ 0.99
LDB1-204ENST00000490751 IGHV3-38A0A0C4DH36 116 aa21.21■□□□□ 0.99
LDB1-204ENST00000490751 PFDN1O60925 122 aa21.21■□□□□ 0.99
LDB1-204ENST00000490751 ARMS2P0C7Q2 107 aa21.21■□□□□ 0.99
LDB1-204ENST00000490751 Q6ZSN1 163 aa21.21■□□□□ 0.99
LDB1-204ENST00000490751 C10orf126Q8N4M7 172 aa21.21■□□□□ 0.99
LDB1-204ENST00000490751 OR10J3Q5JRS4 329 aa21.2■□□□□ 0.98
LDB1-204ENST00000490751 DMRTA1Q5VZB9 504 aa21.2■□□□□ 0.98
LDB1-204ENST00000490751 TMUB2Q71RG4 321 aa21.2■□□□□ 0.98
LDB1-204ENST00000490751 APOBP04114 4563 aaKnown RBP21.19■□□□□ 0.98
LDB1-204ENST00000490751 TMSB15BA0A087X1C1 80 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 TRAV8-6A0A0B4J262 113 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 EREGO14944 169 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 H2AFB1P0C5Y9 115 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 LINC01559Q495D7 138 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 SYT8Q8NBV8 401 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 ATP6V0E2Q8NHE4 81 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 SAMD10Q9BYL1 202 aa21.19■□□□□ 0.98
LDB1-204ENST00000490751 SCO2A0A1W2PP80 73 aa21.18■□□□□ 0.98
LDB1-204ENST00000490751 TPT1P13693 172 aaKnown RBP21.18■□□□□ 0.98
LDB1-204ENST00000490751 LINC01556Q5JQF7 62 aa21.17■□□□□ 0.98
LDB1-204ENST00000490751 LELP1Q5T871 98 aa21.17■□□□□ 0.98
LDB1-204ENST00000490751 UFSP1Q6NVU6 142 aa21.17■□□□□ 0.98
LDB1-204ENST00000490751 GTSF1LQ9H1H1 148 aa21.17■□□□□ 0.98
LDB1-204ENST00000490751 GAGE12JA6NER3 117 aa21.15■□□□□ 0.98
LDB1-204ENST00000490751 S100A9P06702 114 aaKnown RBP21.15■□□□□ 0.98
LDB1-204ENST00000490751 GAGE1Q13065 139 aa21.15■□□□□ 0.98
LDB1-204ENST00000490751 GAGE4Q13068 117 aa21.15■□□□□ 0.98
LDB1-204ENST00000490751 GAGE5Q13069 117 aa21.15■□□□□ 0.98
LDB1-204ENST00000490751 GAGE13Q4V321 117 aa21.15■□□□□ 0.98
LDB1-204ENST00000490751 PHLDA3Q9Y5J5 127 aa21.15■□□□□ 0.98
LDB1-204ENST00000490751 A0A087WTM6 91 aa21.14■□□□□ 0.97
LDB1-204ENST00000490751 SCRT2Q9NQ03 307 aa21.14■□□□□ 0.97
LDB1-204ENST00000490751 BOLA1Q9Y3E2 137 aa21.14■□□□□ 0.97
LDB1-204ENST00000490751 RHODO00212 210 aa21.13■□□□□ 0.97
LDB1-204ENST00000490751 LINC00694P0DN24 101 aa21.13■□□□□ 0.97
LDB1-204ENST00000490751 FUSP35637 526 aaKnown RBP eCLIP21.13■□□□□ 0.971e-7■□□□□ 9.1
LDB1-204ENST00000490751 C14orf178Q8N769 122 aaPredicted RBP21.13■□□□□ 0.97
LDB1-204ENST00000490751 M0R381 172 aa21.12■□□□□ 0.97
LDB1-204ENST00000490751 FAM74A4Q5TZK3 123 aa21.12■□□□□ 0.97
LDB1-204ENST00000490751 KRTAP4-5Q9BYR2 181 aa21.12■□□□□ 0.97
LDB1-204ENST00000490751 PGPEP1Q9NXJ5 209 aa21.12■□□□□ 0.97
LDB1-204ENST00000490751 Q9UF83 564 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms