RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
CLDN11-209ENST00000489485 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
CLDN11-209ENST00000489485 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
CLDN11-209ENST00000489485 OR2D3Q8NGH3 330 aa10.31□□□□□ -0.76
CLDN11-209ENST00000489485 FRZBQ92765 325 aa10.31□□□□□ -0.76
CLDN11-209ENST00000489485 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
CLDN11-209ENST00000489485 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
CLDN11-209ENST00000489485 V9GYV3 84 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 X6R8D5 127 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 TGP01266 2768 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 OR10D4PQ8NGN7 298 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 TP53TG3Q9ULZ0 132 aa10.3□□□□□ -0.76
CLDN11-209ENST00000489485 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 GRIFINA4D1Z8 144 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 CBY3A6NI87 242 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 GNRH2O43555 120 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 GZMBP10144 247 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 PYY3Q5JQD4 70 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 IMMP2LQ96T52 175 aa10.29□□□□□ -0.76
CLDN11-209ENST00000489485 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
CLDN11-209ENST00000489485 PHOX2AO14813 284 aa10.28□□□□□ -0.76
CLDN11-209ENST00000489485 MIFP14174 115 aa10.28□□□□□ -0.76
CLDN11-209ENST00000489485 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
CLDN11-209ENST00000489485 NEU1Q99519 415 aa10.28□□□□□ -0.76
CLDN11-209ENST00000489485 STAB2Q8WWQ8 2551 aa10.28□□□□□ -0.76
CLDN11-209ENST00000489485 DEFB4AO15263 64 aa10.27□□□□□ -0.76
CLDN11-209ENST00000489485 TYMSP04818 313 aa10.27□□□□□ -0.76
CLDN11-209ENST00000489485 AZU1P20160 251 aa10.27□□□□□ -0.76
CLDN11-209ENST00000489485 TDRG1Q3Y452 100 aa10.27□□□□□ -0.76
CLDN11-209ENST00000489485 IGHV4-28A0A0C4DH34 117 aa10.27□□□□□ -0.77
CLDN11-209ENST00000489485 EMP1P54849 157 aa10.27□□□□□ -0.77
CLDN11-209ENST00000489485 FABP4P15090 132 aa10.26□□□□□ -0.77
CLDN11-209ENST00000489485 COA6Q5JTJ3 125 aaKnown RBP10.26□□□□□ -0.77
CLDN11-209ENST00000489485 Q8NAQ8 132 aa10.26□□□□□ -0.77
CLDN11-209ENST00000489485 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
CLDN11-209ENST00000489485 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
CLDN11-209ENST00000489485 XKRY2A2RUG3 117 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 A8MWL6 223 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 TCL1AP56279 114 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 CT83Q5H943 113 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
CLDN11-209ENST00000489485 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 S100A4P26447 101 aaKnown RBP10.25□□□□□ -0.77
CLDN11-209ENST00000489485 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
CLDN11-209ENST00000489485 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
CLDN11-209ENST00000489485 U3KQK5 164 aa10.25□□□□□ -0.77
CLDN11-209ENST00000489485 A0A0J9YWU9 116 aa10.24□□□□□ -0.77
CLDN11-209ENST00000489485 A0A1W2PPQ1 181 aa10.24□□□□□ -0.77
CLDN11-209ENST00000489485 ASIPP42127 132 aa10.24□□□□□ -0.77
CLDN11-209ENST00000489485 ZNF493Q6ZR52 646 aa10.24□□□□□ -0.77
CLDN11-209ENST00000489485 RNASE8Q8TDE3 154 aaKnown RBP10.24□□□□□ -0.77
CLDN11-209ENST00000489485 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
CLDN11-209ENST00000489485 TRGV11A0A075B6L2 103 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 HIGD1CA8MV81 97 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 TSTD3H0UI37 97 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 H3BVH4 76 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 PKIAP61925 76 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 MUC4Q99102 2169 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 MUC21A0A140T8X8 626 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 SMIM27A0A1W2PRY6 76 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 SNURFLB1AK76 121 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
CLDN11-209ENST00000489485 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
CLDN11-209ENST00000489485 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
CLDN11-209ENST00000489485 FER1L6-AS1Q8NA97 138 aa10.22□□□□□ -0.77
CLDN11-209ENST00000489485 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
CLDN11-209ENST00000489485 PGLYRP4Q96LB8 373 aa10.22□□□□□ -0.77
CLDN11-209ENST00000489485 GFRA4Q9GZZ7 299 aa10.22□□□□□ -0.77
CLDN11-209ENST00000489485 SPINK4O60575 86 aa10.21□□□□□ -0.77
CLDN11-209ENST00000489485 IGLC6P0CF74 106 aa10.21□□□□□ -0.77
CLDN11-209ENST00000489485 ZNF415Q09FC8 603 aa10.21□□□□□ -0.77
CLDN11-209ENST00000489485 JOSD1Q15040 202 aaPredicted RBP10.21□□□□□ -0.77
CLDN11-209ENST00000489485 LYZL1Q6UWQ5 148 aa10.21□□□□□ -0.77
CLDN11-209ENST00000489485 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.77
CLDN11-209ENST00000489485 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
CLDN11-209ENST00000489485 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.77
CLDN11-209ENST00000489485 PLAC8L1A1L4L8 177 aa10.21□□□□□ -0.78
CLDN11-209ENST00000489485 FAM231BA6NCW3 169 aa10.21□□□□□ -0.78
CLDN11-209ENST00000489485 TMEM18Q96B42 140 aa10.21□□□□□ -0.78
CLDN11-209ENST00000489485 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.78
CLDN11-209ENST00000489485 FOXA3P55318 350 aaPredicted RBP10.2□□□□□ -0.78
CLDN11-209ENST00000489485 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
CLDN11-209ENST00000489485 PHLDA3Q9Y5J5 127 aa10.2□□□□□ -0.78
CLDN11-209ENST00000489485 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
CLDN11-209ENST00000489485 OR10AG1Q8NH19 301 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms