RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TENM1Q9UKZ4 2725 aa6.38□□□□□ -1.39
VTI1A-207ENST00000489357 IGHV3OR16-13A0A075B7E8 117 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 IGHV3-49A0A0A0MS15 119 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 IGHV3-74A0A0B4J1X5 117 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 HSBP1L1C9JCN9 74 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 M0QZ24 198 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 IGHV3-11P01762 117 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 SNRPD3P62318 126 aaKnown RBP6.37□□□□□ -1.39
VTI1A-207ENST00000489357 LINC01545Q5VT33 79 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 ZNF705AQ6ZN79 300 aaPredicted RBP6.37□□□□□ -1.39
VTI1A-207ENST00000489357 DCANP1Q8TF63 244 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 ZNF747Q9BV97 191 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 ZNF702PQ9H963 129 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 SIGLEC8Q9NYZ4 499 aa6.37□□□□□ -1.39
VTI1A-207ENST00000489357 DNAJC9-AS1A6NH13 148 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 LINC01549A6NIU2 74 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 KLLNB2CW77 178 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 HBDP02042 147 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 LEPP41159 167 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 ASIPP42127 132 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 TM4SF20Q53R12 229 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 SCRT2Q9NQ03 307 aa6.36□□□□□ -1.39
VTI1A-207ENST00000489357 MRPS16Q9Y3D3 137 aaKnown RBP6.36□□□□□ -1.39
VTI1A-207ENST00000489357 OR4C46A6NHA9 309 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 M0R381 172 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 HOXA3O43365 443 aaPredicted RBP6.35□□□□□ -1.39
VTI1A-207ENST00000489357 DUSP14O95147 198 aaKnown RBP6.35□□□□□ -1.39
VTI1A-207ENST00000489357 NXPH4O95158 308 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 TSPOP30536 169 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
VTI1A-207ENST00000489357 LGALS9BQ3B8N2 356 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 TDRG1Q3Y452 100 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 SPANXN1Q5VSR9 72 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.35□□□□□ -1.39
VTI1A-207ENST00000489357 PMCHL2Q9BQD1 86 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 C11orf21Q9P2W6 132 aa6.35□□□□□ -1.39
VTI1A-207ENST00000489357 K7EQG2 157 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 NPYP01303 97 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
VTI1A-207ENST00000489357 CSN3P07498 182 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 G0S2P27469 103 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 SSTP61278 116 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 Q8N8P6 123 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 C4orf3Q8WVX3 66 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 C20orf78Q9BR46 151 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 PEMTQ9UBM1 199 aa6.34□□□□□ -1.39
VTI1A-207ENST00000489357 A0A096LNJ9 63 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 ATP5LO75964 103 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 S100A4P26447 101 aaKnown RBP6.33□□□□□ -1.4
VTI1A-207ENST00000489357 FCER1GP30273 86 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 HNRNPA3P51991 378 aaKnown RBP6.33□□□□□ -1.4
VTI1A-207ENST00000489357 RPL32P62910 135 aaKnown RBP6.33□□□□□ -1.4
VTI1A-207ENST00000489357 POM121L12Q8N7R1 296 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 OR1N2Q8NGR9 330 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 OR2K2Q8NGT1 345 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 SNHG12Q9BXW3 62 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 DPH3P1Q9H4G8 78 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
VTI1A-207ENST00000489357 A0A0J9YX75 114 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 A8MTW9 85 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 NDUFA7O95182 113 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 IGLL1P15814 213 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 HOXD3P31249 432 aaPredicted RBP6.32□□□□□ -1.4
VTI1A-207ENST00000489357 TMEM95Q3KNT9 176 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 PRR9Q5T870 116 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 FAM159AQ6UWV7 190 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 Q6ZN92 141 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 FOXI2Q6ZQN5 318 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 IFI27L1Q96BM0 104 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 DUX5Q96PT3 197 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 MSRB1Q9NZV6 116 aa6.32□□□□□ -1.4
VTI1A-207ENST00000489357 ZMAT5Q9UDW3 170 aaKnown RBP6.32□□□□□ -1.4
VTI1A-207ENST00000489357 WNK1Q9H4A3 2382 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 IGLV2-18A0A075B6J9 118 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 IGHV4OR15-8A0A075B7B6 117 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 A0A087WW49 117 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 C7orf71A4D174 169 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 LINC01619G3V211 115 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 H3BVH4 76 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 EVI2AP22794 236 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 RNASE4P34096 147 aaKnown RBP6.31□□□□□ -1.4
VTI1A-207ENST00000489357 NUTF2P61970 127 aaKnown RBP6.31□□□□□ -1.4
VTI1A-207ENST00000489357 ANXA2RQ3ZCQ2 193 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 ORMDL2Q53FV1 153 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 COL5A1-AS1Q5SY13 56 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 NRACQ8N912 160 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 C16orf95Q9H693 158 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 ANK2Q01484 3957 aa6.31□□□□□ -1.4
VTI1A-207ENST00000489357 TRAV25A0A0B4J276 109 aa6.3□□□□□ -1.4
VTI1A-207ENST00000489357 LOC389332A0A1B0GUA5 103 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms