RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 ODF3Q96PU9 254 aa14.73□□□□□ -0.05
SYNGR1-207ENST00000489206 A0A096LNT2 108 aa14.73□□□□□ -0.05
SYNGR1-207ENST00000489206 TRAV12-1A0A0B4J245 112 aa14.73□□□□□ -0.05
SYNGR1-207ENST00000489206 H3BRM9 83 aa14.73□□□□□ -0.05
SYNGR1-207ENST00000489206 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.72□□□□□ -0.05
SYNGR1-207ENST00000489206 K7EP13 123 aa14.72□□□□□ -0.05
SYNGR1-207ENST00000489206 TMEM95Q3KNT9 176 aa14.72□□□□□ -0.05
SYNGR1-207ENST00000489206 C14orf178Q8N769 122 aaPredicted RBP14.72□□□□□ -0.05
SYNGR1-207ENST00000489206 PTPN13Q12923 2485 aa14.71□□□□□ -0.05
SYNGR1-207ENST00000489206 PLNP26678 52 aa14.71□□□□□ -0.05
SYNGR1-207ENST00000489206 TCTAP57738 103 aa14.71□□□□□ -0.05
SYNGR1-207ENST00000489206 GNRH2O43555 120 aa14.71□□□□□ -0.06
SYNGR1-207ENST00000489206 TOMM6Q96B49 74 aa14.71□□□□□ -0.06
SYNGR1-207ENST00000489206 MRPL35Q9NZE8 188 aaKnown RBP14.71□□□□□ -0.06
SYNGR1-207ENST00000489206 ZFHX3Q15911 3703 aa14.71□□□□□ -0.06
SYNGR1-207ENST00000489206 USP9YO00507 2555 aaPredicted RBP14.7□□□□□ -0.06
SYNGR1-207ENST00000489206 ZC2HC1BQ5TFG8 222 aa14.7□□□□□ -0.06
SYNGR1-207ENST00000489206 FAM159AQ6UWV7 190 aa14.7□□□□□ -0.06
SYNGR1-207ENST00000489206 IGKV2D-26A0A0A0MRZ7 120 aa14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 MGPP08493 103 aa14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 AMMECR1LQ6DCA0 310 aa14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 SRD5A1P18405 259 aa14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 RPL32P62910 135 aaKnown RBP14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 NRGNQ92686 78 aa14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 TMEM160Q9NX00 188 aa14.69□□□□□ -0.06
SYNGR1-207ENST00000489206 C9orf118A6NHY6 69 aa14.68□□□□□ -0.06
SYNGR1-207ENST00000489206 EDN2P20800 178 aa14.68□□□□□ -0.06
SYNGR1-207ENST00000489206 ERASQ7Z444 233 aa14.68□□□□□ -0.06
SYNGR1-207ENST00000489206 CRYBG3Q68DQ2 2970 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 TRAV8-6A0A0B4J262 113 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 H7C1H1 209 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 GTSCR1Q86UQ5 136 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 RPL39LQ96EH5 51 aaKnown RBP14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 HECTD1Q9ULT8 2610 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 MUC4Q99102 2169 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 RNF223E7ERA6 249 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 F8VRH5 84 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 SNRPD3P62318 126 aaKnown RBP14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 SCGB3A1Q96QR1 104 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 VPREB3Q9UKI3 123 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 KIF25-AS1Q9Y6Z4 181 aa14.67□□□□□ -0.06
SYNGR1-207ENST00000489206 VPS13CQ709C8 3753 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 IGHV4OR15-8A0A075B7B6 117 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 A0A087WW49 117 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 LINC01549A6NIU2 74 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 LGALS9O00182 355 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 SPRY2O43597 315 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 ELANEP08246 267 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 LGALS1P09382 135 aaKnown RBP14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 COX6B1P14854 86 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 SPG11Q96JI7 2443 aa14.66□□□□□ -0.06
SYNGR1-207ENST00000489206 TGFAP01135 160 aa14.65□□□□□ -0.06
SYNGR1-207ENST00000489206 FSHBP01225 129 aa14.65□□□□□ -0.06
SYNGR1-207ENST00000489206 K7EQG2 157 aa14.65□□□□□ -0.06
SYNGR1-207ENST00000489206 CHAC1Q9BUX1 264 aa14.65□□□□□ -0.06
SYNGR1-207ENST00000489206 CBY1Q9Y3M2 126 aa14.65□□□□□ -0.06
SYNGR1-207ENST00000489206 A0A0J9YX75 114 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 LINC00315P59091 139 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 HIST2H2BCQ6DN03 193 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 NEXN-AS1Q8NBZ9 246 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 TRBV25-1A0A075B6N4 114 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 C10orf99Q6UWK7 81 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 C2orf66Q6UXQ4 117 aa14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 CHTOPQ9Y3Y2 248 aaKnown RBP14.64□□□□□ -0.07
SYNGR1-207ENST00000489206 CELSR1Q9NYQ6 3014 aa14.63□□□□□ -0.07
SYNGR1-207ENST00000489206 Q6YL49 198 aa14.63□□□□□ -0.07
SYNGR1-207ENST00000489206 GTF2H5Q6ZYL4 71 aa14.63□□□□□ -0.07
SYNGR1-207ENST00000489206 CSTL1Q9H114 145 aa14.63□□□□□ -0.07
SYNGR1-207ENST00000489206 SELENOKQ9Y6D0 94 aa14.63□□□□□ -0.07
SYNGR1-207ENST00000489206 CD7P09564 240 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 ZNF688P0C7X2 276 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 TRAV12-3A0A0B4J271 114 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 DUSP14O95147 198 aaKnown RBP14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 TAL2Q16559 108 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 RNF152Q8N8N0 203 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 UBE2E2Q96LR5 201 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 C9orf85Q96MD7 179 aa14.62□□□□□ -0.07
SYNGR1-207ENST00000489206 CSPG4Q6UVK1 2322 aa14.61□□□□□ -0.07
SYNGR1-207ENST00000489206 ZNF702PQ9H963 129 aa14.61□□□□□ -0.07
SYNGR1-207ENST00000489206 GAGE10A6NGK3 116 aa14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 RNASE8Q8TDE3 154 aaKnown RBP14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 TTTY13Q9BZ97 58 aa14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 FLNBO75369 2602 aaKnown RBP14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 SMIM13P0DJ93 91 aa14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 SYT8Q8NBV8 401 aa14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 BAALCQ8WXS3 180 aa14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 TM2D2Q9BX73 214 aa14.6□□□□□ -0.07
SYNGR1-207ENST00000489206 IGHV3-16A0A0C4DH30 117 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 GCSHP23434 173 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 POLR2KP53803 58 aaKnown RBP14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 SYNJ2BPP57105 145 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 SUMO4Q6EEV6 95 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 UFSP1Q6NVU6 142 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 CYSLTR1Q9Y271 337 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 CR1P17927 2039 aa14.59□□□□□ -0.07
SYNGR1-207ENST00000489206 LINC01619G3V211 115 aa14.58□□□□□ -0.07
SYNGR1-207ENST00000489206 H3BUT2 72 aa14.58□□□□□ -0.07
SYNGR1-207ENST00000489206 IGHV4-31P0DP07 118 aa14.58□□□□□ -0.07
SYNGR1-207ENST00000489206 CDKN1BP46527 198 aa14.58□□□□□ -0.07
SYNGR1-207ENST00000489206 TRBV6-5A0A0K0K1A5 114 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms